DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wsck and Flt1

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_062179.2 Gene:Flt1 / 54251 RGDID:2621 Length:1336 Species:Rattus norvegicus


Alignment Length:664 Identity:138/664 - (20%)
Similarity:249/664 - (37%) Gaps:218/664 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 AQPKILSRTDRTVTIELSPIRN----DNGPLS----------KLLVIVEYVDNALSQPFDAQLLG 303
            ::.|:.:..|.::|:.| .|:|    |:|..:          ::|...|.:...|..|...|.|.
  Rat   605 SKQKMATTQDYSITLNL-VIKNVSLEDSGTYACRARNIYTGEEILRKTEVLVRDLEAPLLLQNLS 668

  Fly   304 SWQ---------QAQQDGVPYYIAAELDYDRPEDNRTRRFVVGDGKRYGRFTNKPLDQPDAHVHI 359
            ..:         ..|..|||   |.::.:                     |.|....|.:..:.:
  Rat   669 DHEVSISGSTTLDCQARGVP---APQITW---------------------FKNNHKIQQEPGIIL 709

  Fly   360 SLGLVSTL---------EGVTKTMYSRGTHDQHVTSLDDFSYATFE--KGQSSVVALAVTCVIFG 413
            ..| .|||         |||.:   .|.|:.:.|  ::..:|.|.:  ..:|::..:.:||....
  Rat   710 GPG-NSTLFIERVTEEDEGVYR---CRATNQKGV--VESSAYLTVQGTSDKSNLELITLTCTCVA 768

  Fly   414 SCLLLSLIAYFYLRYKTCRGRRLTGGNTHEMTLQTPIIERENNGYLVEDDPLPHSPENFKQQLQQ 478
            :.|...|:..|.        |:|...::...|....||        ::.|.:|            
  Rat   769 ATLFWLLLTLFI--------RKLKRSSSEVKTDYLSII--------MDPDEVP------------ 805

  Fly   479 LVEGYERIPRNAL-------RLNVNDVIGDGRFGEIITGKVSTNDFARDCTLHVLCLDDL-NGTT 535
            |.|..||:|.:|.       ||.:...:|.|.||:::  :.|.....:..|...:.:..| .|.|
  Rat   806 LDEQCERLPYDASKWEFARERLKLGKSLGRGAFGKVV--QASAFGIKKSPTCRTVAVKMLKEGAT 868

  Fly   536 QAQ---LLRELRQLSQLKRQEHLLDFYG------------------------VSASPDWFYLIFE 573
            .::   |:.||:.|:.:....::::..|                        :.:..|:|.|..:
  Rat   869 ASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDFFCLNKD 933

  Fly   574 QQ-RMSLKRKLVESRL-MAPSPRLTSLS-----------------------------------EQ 601
            .. .|..|::.:|..| ....|||.|:|                                   |.
  Rat   934 AALHMEPKKEKLEPDLEQDQKPRLDSVSSSESFTSSGFQEDKSVSDVEGGEDYSEISKQPLTMED 998

  Fly   602 LVLQWIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPLPYMNIAR---QQPDHNR- 662
            |: .:.:::|..|.:|||.:.:||.|.:.::.::.:..:|:..||      :||   :.||:.| 
  Rat   999 LI-SYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFG------LARDIYKNPDYVRR 1056

  Fly   663 --------WLAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASNQQLLEAIRAAVRP 719
                    |:|||.: ....:||:|||||...:.||..:|||:||. .|..::.....::..:|.
  Rat  1057 GDTRLPLKWMAPESI-FDKVYSTKSDVWSYGVLLWEIFSLGGSPYP-GVQMDEDFCSRLKEGMRM 1119

  Fly   720 AQPAYVYGDLYQLLLNCWQLEPSERSSCEDVAFGVRQLMTSPRHALSFDRVA---------GGLD 775
            ..|.|...::||::|:||..:|.||                ||.|...:::.         .|.|
  Rat  1120 RTPEYATPEIYQIMLDCWHKDPKER----------------PRFAELVEKLGDLLQANVQQDGKD 1168

  Fly   776 TLPPYLPQLEAVAT 789
            .:|     |.|:.|
  Rat  1169 YIP-----LNAILT 1177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068
fn3 130..222 CDD:278470
TyrKc 493..746 CDD:197581 75/329 (23%)
PTKc 497..750 CDD:270623 74/329 (22%)
Flt1NP_062179.2 IG_like 143..219 CDD:214653
IG_like 237..328 CDD:214653
Ig 245..327 CDD:299845
Ig 353..424 CDD:299845
IG_like 439..552 CDD:214653
Ig 451..549 CDD:143165
IG 568..640 CDD:214652 8/35 (23%)
IGc2 569..640 CDD:197706 8/35 (23%)
I-set 661..748 CDD:254352 22/116 (19%)
IGc2 676..738 CDD:197706 17/89 (19%)
PKc_like 819..1157 CDD:304357 79/364 (22%)
Pkinase_Tyr 827..1154 CDD:285015 78/353 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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