DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wsck and kitb

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_001137390.1 Gene:kitb / 497629 ZFINID:ZDB-GENE-050916-2 Length:957 Species:Danio rerio


Alignment Length:937 Identity:175/937 - (18%)
Similarity:325/937 - (34%) Gaps:300/937 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 CLVA----------MCLGLPLGAAV-----PQ-----EAPAYYYVGCYTARTDLLHESVYAKTPQ 63
            |||.          .|.|..|.||:     ||     ...:..:.|||.....|..:.|.::...
Zfish   134 CLVTDPAVSHLSLQTCNGSALPAALTFITHPQGGITIRNVSKAFEGCYFCAGQLDQKPVKSREYN 198

  Fly    64 TCIEICEHQGHHYAVLASEKCFCANVLEPQEQQDEQLCNT----------RCLANKAQYCGGVGV 118
            ..:.:........::..:|     ||:..|:|:.:..|:.          ..:.::|     ..:
Zfish   199 LVVRLAPESVPAISLSRNE-----NVILIQDQEFKLSCSAVNINHDFHLRWTIPSEA-----TAL 253

  Fly   119 HSYYSTILTKQPGPHHLRISNKTENSLTLSW--------------NA---------------YEA 154
            .|:.|.|   |||      |.:.:.|:|| |              ||               ||.
Zfish   254 ESHKSNI---QPG------SREYQRSITL-WIQSVKINDTGSYRCNARNEKGVSMAAVNLEVYER 308

  Fly   155 RKLLLAGGAEAVLPNQLLDNFLIKAQVLKTYSSLPAFPQPEFMVQSTETQ-FELTDLHPATLYNI 218
            ..:.|..|...|:..:..::..:..::       .::|:|..::.:...| .:.|..|..||:|.
Zfish   309 GFINLTEGENRVVEVREGESLTLSVEI-------TSYPKPNDVLWTYNNQELQNTSEHVITLHNQ 366

  Fly   219 SVR--AMCKDAQVGQSECGQASIEATTEVGLPSPVPAQPKILSRTDRTVTIELSPIRNDNGPLSK 281
            ..|  :..:..:|..||.|..:..|..:             ....:::.|:.             
Zfish   367 QYRYISELRLVRVHGSEGGIYTFSANHK-------------YESVNQSFTVH------------- 405

  Fly   282 LLVIVEYVDNALSQPFDAQLLGSWQQAQQDGVP-----YYIAAELDYDRPEDNRTRRF------- 334
              ||.:.|..:...|.|.|:     :....|.|     :|      |..|...|....       
Zfish   406 --VICKPVIVSQEGPVDGQV-----RCVASGYPVPKISWY------YCEPPHTRCSHLLNATQAD 457

  Fly   335 -----VVGDGKRYGRFTNKPLDQPDAHVHISLGLVSTLEGVTKTMYSRGTHDQHVTSLDDFSYAT 394
                 :...|..:||      .:.::.::||.|...|||.|             .::..:.:|..
Zfish   458 EEFAVITVSGSEFGR------SEVESRLNISKGKFHTLECV-------------ASAQGEQAYTL 503

  Fly   395 FEKGQSSVVALAVTCVIFG---SCLLLSLIAYFYLRYKTCRGRRLTGGNTHEMTLQTPIIERE-- 454
            |...:.:|.....|.::.|   :.:|||.|....| ||               .:|.|..|..  
Zfish   504 FSISERTVPHKLFTPLLSGVVSTSVLLSFILVVLL-YK---------------YMQKPKYEIHWK 552

  Fly   455 -------NNGYLVEDDPLPHSPENFKQQLQQLVEGYERIPRNALRLNVNDVIGDGRFGEIITGKV 512
                   ||...::...||:.|:            :| .||.  ||....::|.|.||:::.   
Zfish   553 VIDSFDGNNYTYIDPTQLPYDPK------------WE-FPRE--RLRFGKILGSGAFGKVVA--- 599

  Fly   513 STNDFARDCTLHVLCLDD-------------LNGTTQAQLLRELRQLSQLKRQEHLLDFYGV--- 561
                    .|.:.||..|             .:.|.:..|:.||:.||.:....::::..|.   
Zfish   600 --------ATAYGLCSADTVTTVAVKMLKPSAHSTEKEALMSELKVLSYIGNHINIVNLLGACTV 656

  Fly   562 -----------------------------SASPDWFY--LIFEQQ------------RMSLKRKL 583
                                         |.:.|.:|  |:.:.|            ..|.:::.
Zfish   657 GGPTLVITEYCCYGDLLNFLRRKRDAFFSSKTGDGYYKNLLSQTQPSIEGTDNGYMPMRSYQKRS 721

  Fly   584 VESRLMAPSPRLTSLSEQLVLQWIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPL 648
            .::........| ||..:.:|.:.|::|..|::|:|...:||.|.:.:|.:|.....|:..||  
Zfish   722 NQTEWCDDKDDL-SLDTEDLLSFSYQVAKGMDFLTSKNCIHRDLAARNVLLTQGRVAKICDFG-- 783

  Fly   649 PYMNIARQ-QPDHN-----------RWLAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYAN 701
                :||. ..|.|           :|::||.| ....::..|||||...:.||..:||.|||. 
Zfish   784 ----LARDITRDSNYVLRGNARLPVKWMSPESL-FACVYTFESDVWSYGILLWEIFSLGNTPYP- 842

  Fly   702 AVASNQQLLEAIRAAVRPAQPAYVYGDLYQLLLNCWQLEPSERSSCEDVAFGVRQLMT-SPRHAL 765
            .:.......:.|:...|.::|.:...::|:::..||..:|.:|...:.:......|:: :.:|..
Zfish   843 GIPVGSTFYKMIQDGYRMSEPEFAPSEIYEVMRWCWSADPLKRPPFKKLVERTELLLSETTKHDY 907

  Fly   766 SFDRVAGGLDT-LPPYLPQLEAVATMG 791
            .....:|..:. :||.|.:.:.::::|
Zfish   908 LNLSTSGSCEAFVPPGLQRPQRLSSVG 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068 12/82 (15%)
fn3 130..222 CDD:278470 23/123 (19%)
TyrKc 493..746 CDD:197581 67/323 (21%)
PTKc 497..750 CDD:270623 66/323 (20%)
kitbNP_001137390.1 IG_like 121..201 CDD:214653 15/66 (23%)
Ig 209..305 CDD:299845 20/115 (17%)
IG 225..305 CDD:214652 16/94 (17%)
Ig 309..407 CDD:299845 18/132 (14%)
I-set 319..406 CDD:254352 16/121 (13%)
PKc_like 547..896 CDD:304357 77/383 (20%)
Pkinase_Tyr 583..894 CDD:285015 67/330 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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