DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wsck and Cad96Ca

DIOPT Version :10

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster


Alignment Length:496 Identity:105/496 - (21%)
Similarity:182/496 - (36%) Gaps:130/496 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 TMYSRGTHDQHVTSLDDFSYATFEKGQSSVVALAVTCVIFGSCLLLSLIAYFYLRYKTCRGRR-- 435
            |..|.|.|:...:.:..||.      :|..:.:.||  :.|..:.::::..:..|.:.|...|  
  Fly   292 TTPSGGHHNNSSSPITIFSL------KSGTIPIVVT--VGGFFVAIAVLLAYLCRRRLCAISRTL 348

  Fly   436 ---------------------LTGGNTHEMTLQT---PII--------ERE-------------- 454
                                 ||..:.:.|.:|.   |:.        ||:              
  Fly   349 KKTKEKEELAKKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQLSTGV 413

  Fly   455 -NNGYLVEDDPLPHSPE---NFKQQLQQLVEGYERIPRNAL--------------RLNVNDVIGD 501
             |.|......|.|.:.|   |..........|....|.||.              ||...:::|:
  Fly   414 TNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDRWEFPRYRLKFFNILGE 478

  Fly   502 GRFGEI-------ITGKVSTNDFARDCTLHVLCL-DDLNGTTQAQLLRELRQLSQLKRQEHLLDF 558
            |.||::       |.|.....      |:.|..| :......:..||.||..:..|:...:::..
  Fly   479 GAFGQVWRCEATNINGNEGIT------TVAVKTLKESATEVDRKDLLSELEVMKSLEPHINVVHL 537

  Fly   559 YGVSASPDWFYLIFEQ-QRMSLKRKLVESR-------LMAPSPRLTSLSEQLVLQWIYELASAMN 615
            .|.....|..::|.|. .|..|:..|..||       ....|..|||..   :..::|::|..|:
  Fly   538 LGCCTDKDPTFVILEYVNRGKLQTYLRSSRAERHYGNTHGKSNVLTSCD---LTSFMYQVAKGMD 599

  Fly   616 YLSSCQVVHRQLCSHSVFVTSDFKLKLSVF-----------------GPLPYMNIARQQPDHNRW 663
            ||:|..::||.|.:.::.:|.|...|::.|                 |.||.           ||
  Fly   600 YLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGKLPI-----------RW 653

  Fly   664 LAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASNQQLLEAIRAAVRPAQPAYVYGD 728
            :|.|.| :.:..|.:||:||...:.||...||.|||....|::  ::..:|...|..:|.:...:
  Fly   654 MATESL-YDNIFSVKSDIWSFGILMWEIVTLGSTPYPGISAAD--VMRKVRDGYRLEKPEHCRRE 715

  Fly   729 LYQLLLNCWQLEPSERSSCEDVAFGVRQLMTSPRHALSFDR 769
            ||.::..||..:|.||....::...:.:|:.:....:..:|
  Fly   716 LYNIMYYCWSHDPQERPLFAEIIQMLDKLLHTEMDYIELER 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:460348
fn3 130..222 CDD:394996
PTKc 497..750 CDD:270623 71/285 (25%)
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
PTKc 474..742 CDD:270623 71/290 (24%)
Blue background indicates that the domain is not in the aligned region.

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