DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wsck and Fgfrl1

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_954545.1 Gene:Fgfrl1 / 360903 RGDID:735156 Length:529 Species:Rattus norvegicus


Alignment Length:204 Identity:44/204 - (21%)
Similarity:77/204 - (37%) Gaps:56/204 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 LKTYSSLPAFPQPEFM---VQSTETQFELTDLHPATLYNISVRAMCKDAQVGQSEC----GQASI 239
            ||..:|  ..|:|:.|   ...|.|:.|.:: |....:.:|::.: |....|:..|    ...:|
  Rat   166 LKCVAS--GHPRPDIMWMKDDQTLTRLEASE-HRKKKWTLSLKNL-KPEDSGKYTCRVSNRAGAI 226

  Fly   240 EATTEVGLPSPVPAQPKILSRTDRTVTIELS-------PIRNDNGPLSKLLVIVEYVDNALSQPF 297
            .||.:|.:.....::|.:........|::..       .:|:|..|:.:.|..|||         
  Rat   227 NATYKVDVIQRTRSKPVLTGTHPVNTTVDFGGTTSFQCKVRSDVKPVIQWLKRVEY--------- 282

  Fly   298 DAQLLGSWQQAQQDGVPYYIAAELDYDRPEDNRTRRFVV---GD--GKRYGRFTNKPL----DQP 353
                                .:|..::...|...::|||   ||  .:..|.:.||.|    .|.
  Rat   283 --------------------GSEGRHNSTIDVGGQKFVVLPTGDVWSRPDGSYLNKLLISRARQD 327

  Fly   354 DAHVHISLG 362
            ||.::|.||
  Rat   328 DAGMYICLG 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068
fn3 130..222 CDD:278470 11/42 (26%)
TyrKc 493..746 CDD:197581
PTKc 497..750 CDD:270623
Fgfrl1NP_954545.1 I-set 29..112 CDD:400151
Ig strand A' 35..38 CDD:409353
Ig strand B 41..50 CDD:409353
Ig strand C 56..61 CDD:409353
Ig strand C' 64..67 CDD:409353
Ig strand D 72..77 CDD:409353
Ig strand E 78..84 CDD:409353
Ig strand F 91..99 CDD:409353
Ig strand G 102..112 CDD:409353
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 117..152
IgI_2_FGFRL1-like 143..234 CDD:409442 18/71 (25%)
Ig strand B 164..168 CDD:409442 1/1 (100%)
Ig strand C 177..181 CDD:409442 1/3 (33%)
Ig strand E 200..204 CDD:409442 0/3 (0%)
Ig strand F 214..219 CDD:409442 1/4 (25%)
Ig strand G 227..230 CDD:409442 1/2 (50%)
Ig 242..350 CDD:416386 26/124 (21%)
Ig strand A 242..245 CDD:409353 1/2 (50%)
Ig strand A' 249..253 CDD:409353 0/3 (0%)
Ig strand B 261..268 CDD:409353 0/6 (0%)
Ig strand C 272..279 CDD:409353 2/6 (33%)
Ig strand D 304..309 CDD:409353 2/4 (50%)
Ig strand E 317..322 CDD:409353 3/4 (75%)
Ig strand F 330..338 CDD:409353 3/7 (43%)
Ig strand G 341..349 CDD:409353
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 405..427
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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