DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wsck and Src42A

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster


Alignment Length:694 Identity:152/694 - (21%)
Similarity:245/694 - (35%) Gaps:169/694 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 EPQEQ--QDEQLCNTRCLANKAQYCGGVGVHSYYSTILTKQPGPHHLRISNKTENSLTLSWNAYE 153
            ||:|:  .:||:| ||....|:.....:.:....|.  ...|.|...|.|.|....|........
  Fly  1038 EPEEKCASEEQMC-TRNALTKSSSLDAISLSVAISP--ASSPSPPRPRRSLKQHRCLQQHQQTPL 1099

  Fly   154 ARKLLLAGGAEAVLPNQLLDNFLIKAQVLKTYSSLPAFPQPEFMVQSTETQFELTDLHPATLYNI 218
            |:|             ..|||.|   ||:.:.:|    .|| ....|.:|..:.| .|||| ..:
  Fly  1100 AKK-------------HSLDNCL---QVVSSTTS----RQP-LRRWSNQTPLKCT-CHPAT-EEL 1141

  Fly   219 SVRAMCKDAQVGQSECGQASIEATTEVGLPSPVPAQPKILSRTDRTVTIELSPIRNDNGPLSKLL 283
            .:.|:.|...: .:.|..:.......:.:....||..|...:|..| |.:....|.         
  Fly  1142 PLTAIEKSRSL-PAACSASCSHTCAHLSVIDQSPATTKCFGKTSLT-TAKKGKSRR--------- 1195

  Fly   284 VIVEYVDNALSQPFDAQLLG--SWQQAQQDGVPYY-----IAAELDYDRPEDNRTRRFVVGDGKR 341
                     ||:....:.|.  ||         |:     |.||.....||:            .
  Fly  1196 ---------LSEFTRGEFLNEKSW---------YFRKIKRIEAEKKLLLPEN------------E 1230

  Fly   342 YGRFTNKPLDQPDAHVHISLGLVSTLEGVTKTMYSRGTHDQHVTSLDDFSYATFEKGQSSVVALA 406
            :|.|..:  |....|...||   |..:|.|...|       .:..||       |.|        
  Fly  1231 HGAFLIR--DSESRHNDYSL---SVRDGDTVKHY-------RIRQLD-------EGG-------- 1268

  Fly   407 VTCVIFGSCLLLSLIAYFYLRYKTCRGRRLTGGNTHEMTLQTPIIE---RENNGYLVE-DDPLPH 467
                            :|..|..|.|            ||| .::|   ::::|..|. ..|...
  Fly  1269 ----------------FFIARRTTFR------------TLQ-ELVEHYSKDSDGLCVNLCKPCVQ 1304

  Fly   468 SPENFKQQLQQLVEGYERIPRNALRLNVNDVIGDGRFGEIITGKVSTNDFARDCTLHVLCLDDLN 532
            ..:...:.|.........|.|.:|:....  :|.|:||::..|..:........||....:|..:
  Fly  1305 IEKPVTEGLSHRTRDQWEIDRTSLKFVRK--LGSGQFGDVWEGLWNNTTPVAIKTLKSGTMDPKD 1367

  Fly   533 GTTQAQLLRELRQLSQLKRQEHLLDFYGVSASPDWFYLIFEQQRMSLKRKLVESRLMAPSPRLTS 597
            ...:||::::||...       |:..|.|....:..|:|.|    .:|...:...|.|.:.:..|
  Fly  1368 FLAEAQIMKKLRHTK-------LIQLYAVCTVEEPIYIITE----LMKHGSLLEYLQAIAGKGRS 1421

  Fly   598 LSEQLVLQWIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPLPYMNIAR--QQPDH 660
            |..|.::....::|:.|.||.|...:||.|.:.:|.|.....:|::.||      :||  ::.::
  Fly  1422 LKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFG------LARLIKEDEY 1480

  Fly   661 N---------RWLAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASNQQLLEAIRAA 716
            .         :|.|||...:. ..|.:|||||...:..|....|..||..  .:|.::|..:...
  Fly  1481 EARVGARFPIKWTAPEAANYS-KFSIKSDVWSFGILLTELVTYGRIPYPG--MTNAEVLTQVEHG 1542

  Fly   717 VRPAQPAYVYGDLYQLLLNCWQLEPSERSSCEDVAFGVRQLMTS 760
            .|..||......||:::|.||..:|..|.:.|.:.:.:....||
  Fly  1543 YRMPQPPNCEPRLYEIMLECWHKDPMRRPTFETLQWKLEDFYTS 1586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068 9/25 (36%)
fn3 130..222 CDD:278470 24/91 (26%)
TyrKc 493..746 CDD:197581 65/263 (25%)
PTKc 497..750 CDD:270623 66/263 (25%)
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 31/167 (19%)
PTKc_Frk_like 1319..1587 CDD:270653 71/290 (24%)
Pkinase_Tyr 1328..1580 CDD:285015 67/273 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24418
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.