DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wsck and tek

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:XP_009299388.1 Gene:tek / 30747 ZFINID:ZDB-GENE-990415-56 Length:1117 Species:Danio rerio


Alignment Length:684 Identity:155/684 - (22%)
Similarity:264/684 - (38%) Gaps:158/684 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 GGVGVHSYYSTILTKQP-GPHHLRISNKTENSLTLSWN--------AYEARKLLLAGGAEAVLPN 169
            |..|..:.:||.:.:.| |   :::|..::.:|.|||:        .||..  .|..||...|..
Zfish   525 GQAGPAATFSTQVLELPVG---VKLSAVSQTALLLSWDIAPAEQHCTYEVS--CLQAGAPGTLRT 584

  Fly   170 QLLDNFLIKAQVLKTYSSLPAFPQPEFMVQSTETQFELTDLHPATLYNISVRAMCKDAQVGQSEC 234
                                      |.:.|..:...|:||.|...|..:||:.|   .|||:. 
Zfish   585 --------------------------FQLPSNSSAMHLSDLKPRHKYQCTVRSSC---GVGQNH- 619

  Fly   235 GQASIEATTEVGLPSPVPAQPKILSRTDRTVTIELSPIRNDNGPLSKLLVIVEYVDNALSQPFDA 299
            ..||....::..||.| ||...|.:.:|.:..:..:....::  :|:.::..:.|:.|       
Zfish   620 PSASAWTLSDPELPPP-PANISIWNISDTSAVLTWAVAEGES--VSRAVIRFQQVEQA------- 674

  Fly   300 QLLGSWQQAQQDGVPYYIAAELDYDRPEDNRTRRFVVGDGKRYGRFTNKPLDQPDAHVHISLGLV 364
                  |..||..:|                     |...:.:.||....| :|:....:.|..|
Zfish   675 ------QYRQQVELP---------------------VQTQQLHMRFQLLGL-RPNTGYQLQLWTV 711

  Fly   365 STL-EGVTKTMYSRGTHDQHVTSLDDFSYATF-EKGQSSVVAL----AVTC--VIFGSCLLLSLI 421
            :.: |.......|..|..|..:|      |.| ..|...:.|:    .:||  |:...|::|.| 
Zfish   712 NNMGESAESPPVSLMTLPQQESS------ALFAAHGHLLLYAILGSAGMTCCTVLLAFCIVLQL- 769

  Fly   422 AYFYLRYKTCRGRRLTGGNTHEMTLQTPI--IERENNGYLVEDDPLPHSPENFKQQLQQLVEGYE 484
                                ...|||..|  |.||.........|.||       :...:|....
Zfish   770 --------------------KRNTLQRRIHSILREEPAVHFSSAPPPH-------RRSAVVSRSL 807

  Fly   485 RIPRNALR---LNVNDVIGDGRFGEIITGKVSTNDFARDCTLHVLCLDDLNGTTQAQLLRELRQL 546
            ..|  ||:   :...||:|:|.||:::..::..:....|..:..: .|..:.........||..|
Zfish   808 VFP--ALQWSDIQFQDVLGEGNFGQVLKARIRKDGLRMDAAVKRM-KDYASQDDHRDFAGELEVL 869

  Fly   547 SQLKRQEHLLDFYGVSASPDWFYLIFE-QQRMSLKRKLVESRLMAPSPRL-------TSLSEQLV 603
            .:|...::::...|......:.||..| ....:|...|.:||::...|..       ::||.|.:
Zfish   870 CRLGPHKNIIHLLGACEHRGYLYLAIEFAPHGNLLDFLRKSRVLETDPAFAIAHRTASTLSSQQL 934

  Fly   604 LQWIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPLPYMNIARQQPDH-------- 660
            |.:..::|..|:|||..|.:||.|.:.:|.|..:|..|::.||      ::|.|..:        
Zfish   935 LAFSADVARGMSYLSQKQFIHRDLAARNVLVGENFVAKIADFG------LSRGQEVYVKKTMGRL 993

  Fly   661 -NRWLAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASNQQLLEAIRAAVRPAQPAY 724
             .||:|.|.|.:. .::|.|||||...:.||..:||||||.....:  :|.|.:....|..:|..
Zfish   994 PVRWMAIESLNYS-VYTTNSDVWSYGVLLWEVVSLGGTPYCGMTCA--ELYEKLPLGFRLEKPLN 1055

  Fly   725 VYGDLYQLLLNCWQLEPSERSSCEDVAFGVRQLM 758
            ...::|:|:..||:.:|.||.|...:...:.:::
Zfish  1056 CDDEVYELMQQCWREKPFERPSFSQILLSLGRML 1089

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity