DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wsck and Csf1r

DIOPT Version :10

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_001424441.1 Gene:Csf1r / 307403 RGDID:2425 Length:978 Species:Rattus norvegicus


Alignment Length:761 Identity:152/761 - (19%)
Similarity:261/761 - (34%) Gaps:260/761 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 YSTILTKQPGPHHLRISNKTENSLTLSWNAYEARKLLLAGGAEAVLPNQLLDNFLIKAQVLKTYS 186
            ||.:.....|          .|:.|:::...|:..|.|. ..:::|....:...|....:...|.
  Rat   276 YSCVANNAAG----------SNTATMNFQVVESAYLNLT-SEQSLLQEVSVGENLDLTVIADAYP 329

  Fly   187 SL---------PAFPQP---EFMVQSTETQFELTDLHPATLYNISVRAMCKDAQVGQSECG---- 235
            .|         |.|..|   ||..|.|...:.. .||   |..:......:.:.:.|::.|    
  Rat   330 GLQRYNWTYLGPFFEDPHNLEFRTQWTTYSYSF-KLH---LNRVKPLEAGRYSLMAQNKAGWNNL 390

  Fly   236 --QASIEATTEV------------------GLPSPVPAQPKILSRTDRTVTIELSPIRNDNGPLS 280
              :.::....||                  |.|.|.....:....|||....:.|.:.:|..|  
  Rat   391 TFELTLRYPPEVSVTWIPVNGSDVLLCDVSGYPQPNVTWMECRGHTDRCDEAQASQVWDDTQP-- 453

  Fly   281 KLLVIVEYVDNALSQ-PFDAQLLGSWQQAQQDGVPY--------YIAAELDYDRPEDNRTRRFVV 336
                      ..||| ||...:|       |..:|.        |:.      |..:|      |
  Rat   454 ----------EVLSQKPFHRVIL-------QSQLPIGTLKHNMTYVC------RAHNN------V 489

  Fly   337 GDGKRYGRFTNKPLDQPDAHVHISLGLVSTLEGVTKTMYSRGTHDQHVTSLDDFSYATFEKGQSS 401
            |:..::.|             .||||            .|:...|:::                 
  Rat   490 GNSSQFFR-------------AISLG------------QSKQLPDEYL----------------- 512

  Fly   402 VVALAVTCVIFGSCLLLSLIAYFYLRYKTCRGRRLTGGNTHEMTLQTPIIER-ENNGY-LVEDDP 464
            ...:.|.|:...|.|:|.|:...| :||          ...:..::..|||. |.|.| .::...
  Rat   513 FTPVVVACISVMSLLVLLLLLLLY-KYK----------QKPKYQVRWKIIESYEGNNYTFIDPTQ 566

  Fly   465 LPHSPENFKQQLQQLVEGYERIPRNALRLNVNDVIGDGRFGEII------TGKVSTNDFARDCTL 523
            ||::            |.:| .|||  .|.....:|.|.||:::      .||       .|..|
  Rat   567 LPYN------------EKWE-FPRN--NLQFGKTLGAGAFGKVVEATAFGLGK-------EDAVL 609

  Fly   524 HVLCLDDLNGTTQAQ----LLRELRQLSQLKRQEHLLDFYGV----------------------- 561
            .| .:..|..|..|.    |:.||:.:|.|.:.|::::..|.                       
  Rat   610 KV-AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 673

  Fly   562 ----------SASP------DWFYLIFEQQRMSLKR----------KLVESRLMAPSPRLTSLSE 600
                      |.||      |..|.....::..::|          ..||.|.::.|...:...:
  Rat   674 RRKAEAMLGPSLSPGQDPEGDSSYKNIHLEKKYVRRDSGFSSQGVDTYVEMRPVSTSSNDSFFKQ 738

  Fly   601 QL------------VLQWIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPLPYMNI 653
            .|            :|.:..::|..|.:|:|...:||.:.:.:|.:||....|:..||      :
  Rat   739 DLDKEASRPLELWDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTSGHVAKIGDFG------L 797

  Fly   654 ARQ-QPDHN-----------RWLAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASN 706
            ||. ..|.|           :|:|||.: ....::.:|||||...:.||..:||..||...:.:|
  Rat   798 ARDIMNDSNYVVKGNARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNN 861

  Fly   707 QQLLEAIRAAVRPAQPAYVYGDLYQLLLNCWQLEPSERSSCEDVAF 752
             :..:.::...:.|||.:...::|.::.:||.|||::|.:.:.:.|
  Rat   862 -KFYKLVKDGYQMAQPVFAPENIYSIMQSCWDLEPTKRPTFQQICF 906

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:460348
fn3 130..222 CDD:394996 20/103 (19%)
PTKc 497..750 CDD:270623 73/335 (22%)
Csf1rNP_001424441.1 None
Blue background indicates that the domain is not in the aligned region.

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