DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wsck and FGFR4

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_001341913.1 Gene:FGFR4 / 2264 HGNCID:3691 Length:802 Species:Homo sapiens


Alignment Length:615 Identity:141/615 - (22%)
Similarity:232/615 - (37%) Gaps:168/615 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 QASIEATTEVGLPSPVPAQPKILSRTD------RTVTIELSPIRNDNGPLSKLL---------VI 285
            ||.:.|.|...:.|.|....|:.|...      :.:.|..|....|..|..::|         |.
Human   252 QAGLPANTTAVVGSDVELLCKVYSDAQPHIQWLKHIVINGSSFGADGFPYVQVLKTADINSSEVE 316

  Fly   286 VEYVDNALSQPFDAQ----LLG-----SWQQA------QQDGVPYYIAAELDYDRPEDNRTRRFV 335
            |.|:.|..::  ||.    |.|     |:|.|      ::|  |.:.||     .||...|...:
Human   317 VLYLRNVSAE--DAGEYTCLAGNSIGLSYQSAWLTVLPEED--PTWTAA-----APEARYTDIIL 372

  Fly   336 VGDGKRYGRFTNKPLDQPDAHVHISLGLVSTLEGVTKTMYSRGTHDQ---HVTSLDDFSYA---T 394
            ...|.                  ::|.::..|.|:.:.....|.|.:   .|..|..|..|   :
Human   373 YASGS------------------LALAVLLLLAGLYRGQALHGRHPRPPATVQKLSRFPLARQFS 419

  Fly   395 FEKG----QSSVVALAVTCVIFGSCLLLSLIAYFYLRYKTCRGRRLTGGNTHEMTLQTPIIEREN 455
            .|.|    .||.:...|.....|..||..|:                       :|..|:     
Human   420 LESGSSGKSSSSLVRGVRLSSSGPALLAGLV-----------------------SLDLPL----- 456

  Fly   456 NGYLVEDDPLPHSPENFKQQLQQLVEGYERIPRNALRLNVNDVIGDGRFGEIITGKVSTNDFARD 520
                   |||...|.:                    ||.:...:|:|.||:::..:....|.||.
Human   457 -------DPLWEFPRD--------------------RLVLGKPLGEGCFGQVVRAEAFGMDPARP 494

  Fly   521 ---CTLHVLCL-DDLNGTTQAQLLRELRQLSQLKRQEHLLDFYGVSASPDWFYLIFEQQRMSLKR 581
               .|:.|..| |:.:....|.|:.|:..:..:.|.:::::..||.......|:|.|.......|
Human   495 DQASTVAVKMLKDNASDKDLADLVSEMEVMKLIGRHKNIINLLGVCTQEGPLYVIVECAAKGNLR 559

  Fly   582 KLVESRLMAPSPRLT---------SLSEQLVLQWIYELASAMNYLSSCQVVHRQLCSHSVFVTSD 637
            :.:.:| ..|.|.|:         .||..:::...|::|..|.||.|.:.:||.|.:.:|.||.|
Human   560 EFLRAR-RPPGPDLSPDGPRSSEGPLSFPVLVSCAYQVARGMQYLESRKCIHRDLAARNVLVTED 623

  Fly   638 FKLKLSVFGPLPYMNIAR--------QQPDHNR----WLAPEVLRHQHHHSTRSDVWSLACVAWE 690
            ..:|::.||      :||        ::..:.|    |:|||.| ....::.:|||||...:.||
Human   624 NVMKIADFG------LARGVHHIDYYKKTSNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGILLWE 681

  Fly   691 CCALGGTPYANAVASNQQLLEAIRAAVRPAQPAYVYGDLYQLLLNCWQLEPSERSSCEDVAFGVR 755
            ...|||:||.....  ::|...:|...|..:|.:...:||.|:..||...||:|.:.:.:...:.
Human   682 IFTLGGSPYPGIPV--EELFSLLREGHRMDRPPHCPPELYGLMRECWHAAPSQRPTFKQLVEALD 744

  Fly   756 QLMTSPRHALSFDRVAGGLD---TLPPYLP 782
            :::.    |:|.:.    ||   |..||.|
Human   745 KVLL----AVSEEY----LDLRLTFGPYSP 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068
fn3 130..222 CDD:278470
TyrKc 493..746 CDD:197581 76/277 (27%)
PTKc 497..750 CDD:270623 75/277 (27%)
FGFR4NP_001341913.1 IGc2 50..107 CDD:197706
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 119..148
Ig 157..241 CDD:325142
Ig3_FGFR-2 264..351 CDD:143266 20/88 (23%)
PKc_like 454..767 CDD:328722 90/363 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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