DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wsck and old-2

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_496123.1 Gene:old-2 / 191738 WormBaseID:WBGene00003863 Length:498 Species:Caenorhabditis elegans


Alignment Length:452 Identity:99/452 - (21%)
Similarity:182/452 - (40%) Gaps:119/452 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 EKGQSSV------------VALAVTCVIFGSCLLLSLIAYFYLRYKTCRGRRL----TGGNTHEM 444
            |.|.|:|            ||||:     |.|.|:.       .||: :.|:|    :.||.:.:
 Worm    45 ELGDSNVQQIIFISLYSVFVALAI-----GICCLIK-------AYKS-KKRQLPANRSKGNEYLL 96

  Fly   445 TLQTPIIERENNGYLVEDDPLPH----------------SPENFKQQLQ--------QLVEGYER 485
            ...|...::..:..:|..:|.|:                |.|....:|:        :.:..|..
 Worm    97 EPTTADQKKRYSNNIVPPEPTPYPITSGEDDFGKTPSRLSNEECPPELKLAPINDRIKYLHYYAE 161

  Fly   486 IPRNALRLNVND--VIGDGRFGEIITG----KVSTNDFARDCTLHVLC---LDDLNGTTQAQLLR 541
            :..|...|:::.  .:|.|.||.|..|    |.|.|. ..:..|.|..   |::.|...|..:..
 Worm   162 VEINEEDLDISKGRPLGSGEFGIIRKGFLRSKNSKNK-ETESRLEVAVKSPLNEYNHIQQELIYD 225

  Fly   542 ELRQLSQLKRQEHLLDFYGVSASPDWFYLIFEQQRMSLKRKLVES----------------RLMA 590
            ||:.:..:.:..::|...|        .:...::||.:. :|||:                ..:|
 Worm   226 ELKVMCAVGKHPNILALVG--------GITIGEKRMIIS-ELVENGDLLSFLRKNRRNFTIDQLA 281

  Fly   591 PSPRLTSLSEQLVLQWIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPLPYMNIAR 655
            ..|...||....::.:.:::|..|.||.....|||.|...:|.:..:..::::.||      :||
 Worm   282 FEPEKPSLGLVDLVSFAFQIAKGMEYLIHVPCVHRDLALRNVLIKGNMVIRIADFG------LAR 340

  Fly   656 QQ---------------PDHNRWLAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVAS 705
            :.               |.|  |:|||.: .:...:.:|||||.....:|..:||.:||.|.:..
 Worm   341 RHKNKDYYKTQSVDTPLPIH--WMAPESI-DKLLFTQKSDVWSYGVCLYELFSLGKSPYKNVIKY 402

  Fly   706 NQQ------LLEAIRAAVRPAQPAYVYGDLYQLLLNCWQLEPSERSSCED-VAFGVRQLMTS 760
            :::      :|..:....|.||||:...::|.::..||.|:.:.|::..| :.|..::|.|:
 Worm   403 DERDSYCKYVLAYLNEGKRLAQPAHADAEIYNVMKLCWDLDMNSRTTFLDCIEFFEKELKTT 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068
fn3 130..222 CDD:278470
TyrKc 493..746 CDD:197581 69/298 (23%)
PTKc 497..750 CDD:270623 69/299 (23%)
old-2NP_496123.1 PTKc 175..458 CDD:270623 70/301 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.