DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wsck and Pdgfra

DIOPT Version :10

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_035188.2 Gene:Pdgfra / 18595 MGIID:97530 Length:1089 Species:Mus musculus


Alignment Length:907 Identity:186/907 - (20%)
Similarity:308/907 - (33%) Gaps:322/907 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 AQYCGGVGVHSYYSTILTKQPGPHHLRISNKTENSLTLSWNAY------------EARKLLLAGG 162
            |.|....|.:..:|.      ||:....:.|.....|..:|.|            :||:.:...|
Mouse   170 ASYDSRQGFNGTFSV------GPYICEATVKGRTFKTSEFNVYALKATSELNLEMDARQTVYKAG 228

  Fly   163 AEAVLPNQLLDNFLIKAQVLKTYSSLPAFPQPEFMVQSTETQFELTDLHPATLYNISV-RAMCKD 226
            ...|:...:.:|.::..|  .||   |...:.:.:....|.:.....|    :|.::| :|..||
Mouse   229 ETIVVTCAVFNNEVVDLQ--WTY---PGEVRNKGITMLEEIKLPSIKL----VYTLTVPKATVKD 284

  Fly   227 AQVGQSECGQASIEATTEV-------------GLPSPVPA-----------------------QP 255
            :  |:.||  |:.:||.||             |.....|.                       .|
Mouse   285 S--GEYEC--AARQATKEVKEMKRVTISVHEKGFVEIEPTFGQLEAVNLHEVREFVVEVQAYPTP 345

  Fly   256 KILSRTDRTVTIE--------------------LSPIRNDNGPLSKLLVIVEYVDNALSQPFDAQ 300
            :|....|....||                    |..||..........:||:..|:..|..|:..
Mouse   346 RISWLKDNLTLIENLTEITTDVQKSQETRYQSKLKLIRAKEEDSGHYTIIVQNEDDVKSYTFELS 410

  Fly   301 LLGSWQQAQQDGVPYYIAAELDYDRPEDNRTRRFVVGD-----GKRYGRFT--NKPLDQPDAHV- 357
            .|          ||   |:.||            :|.|     |.:..|.|  ..||.:.|..: 
Mouse   411 TL----------VP---ASILD------------LVDDHHGSGGGQTVRCTAEGTPLPEIDWMIC 450

  Fly   358 -HIS--------LGLVSTLEGVTKTMYSRG--THDQHVTSLDDFSYATFE---------KGQSSV 402
             ||.        ..|.|.:..:...:..||  |.:..|      |:|..|         |...||
Mouse   451 KHIKKCNNDTSWTVLASNVSNIITELPRRGRSTVEGRV------SFAKVEETIAVRCLAKNNLSV 509

  Fly   403 VA---------------LAVTCVIFGSCLLLSLIAYFYL-----RYKTCRGRRLTGGNTHEMTLQ 447
            ||               :|...::....:::|||....:     ||: .|.|.:..         
Mouse   510 VARELKLVAPTLRSELTVAAAVLVLLVIVIVSLIVLVVIWKQKPRYE-IRWRVIES--------- 564

  Fly   448 TPIIERENNGYL-VEDDPLPHSPENFKQQLQQLVEGYERIPRNALRLNVNDVIGDGRFGEIITGK 511
               |..:.:.|: |:...||:             :.....||:.|.|  ..::|.|.||:::.| 
Mouse   565 ---ISPDGHEYIYVDPMQLPY-------------DSRWEFPRDGLVL--GRILGSGAFGKVVEG- 610

  Fly   512 VSTNDFARDCTLHVLCLDDLNGTTQAQLLRELRQLSQLKRQEHL--------------------- 555
             :....:|...:..:.:..|..|.::...:.|  :|:||...||                     
Mouse   611 -TAYGLSRSQPVMKVAVKMLKPTARSSEKQAL--MSELKIMTHLGPHLNIVNLLGACTKSGPIYI 672

  Fly   556 --------------------------------LDFYGVSASPD----WFYLIFE----------- 573
                                            ||.:|::.:.:    :..|.||           
Mouse   673 ITEYCFYGDLVNYLHKNRDSFMSQHPEKPKKDLDIFGLNPADESTRSYVILSFENNGDYMDMKQA 737

  Fly   574 ---QQRMSLKRKLV-------------------ESRLMAPSPRLTS--LSEQL----VLQWIYEL 610
               |....|:||.|                   :|.|.:....|.|  .||.|    :|.:.|::
Mouse   738 DTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKNLLSDDDSEGLTLLDLLSFTYQV 802

  Fly   611 ASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPLPYMNIARQ-QPDHN-----------RW 663
            |..|.:|:|...|||.|.:.:|.:.....:|:..||      :||. ..|.|           :|
Mouse   803 ARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFG------LARDIMHDSNYVSKGSTFLPVKW 861

  Fly   664 LAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASNQQLLEAIRAAVRPAQPAYVYGD 728
            :|||.: ..:.::|.|||||...:.||..:||||||...:. :......|::..|.|:|.:...:
Mouse   862 MAPESI-FDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMV-DSTFYNKIKSGYRMAKPDHATSE 924

  Fly   729 LYQLLLNCWQLEPSERSSCEDVAFGVRQLMTSPRHALSFDRVAGGLDTLPPYLPQLEAVATM 790
            :|::::.||..||.:|.|...::..|..|:.. ::..|::::  .||.|....|   |||.|
Mouse   925 VYEIMVQCWNSEPEKRPSFYHLSEIVENLLPG-QYKKSYEKI--HLDFLKSDHP---AVARM 980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:460348 2/4 (50%)
fn3 130..222 CDD:394996 19/104 (18%)
PTKc 497..750 CDD:270623 79/360 (22%)
PdgfraNP_035188.2 Ig_3 28..100 CDD:464046
Ig 212..310 CDD:472250 24/110 (22%)
Ig strand B 231..235 CDD:409353 1/3 (33%)
Ig strand C 244..248 CDD:409353 1/5 (20%)
Ig strand E 273..277 CDD:409353 1/3 (33%)
Ig strand F 287..292 CDD:409353 2/6 (33%)
Ig strand G 302..305 CDD:409353 0/2 (0%)
Ig4_PDGFR 313..413 CDD:409445 16/109 (15%)
PTKc_PDGFR_alpha 555..956 CDD:173653 93/440 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1018..1089
Blue background indicates that the domain is not in the aligned region.

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