DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wsck and kin-30

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_506771.3 Gene:kin-30 / 180032 WormBaseID:WBGene00002211 Length:458 Species:Caenorhabditis elegans


Alignment Length:445 Identity:93/445 - (20%)
Similarity:164/445 - (36%) Gaps:131/445 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 EKGQSSVVALAVTCVIFGSCLLLSLIAYFYLR--YK---TCRGRR------------LTGGNTHE 443
            ||....:|.|.....|:| .|.:..:...:||  |:   |..|.|            |...::..
 Worm    23 EKPNLIIVFLMCALFIYG-VLSIIFVTICFLRRIYRSSATKNGNRRYLVQNTYVKAQLDTNSSSS 86

  Fly   444 MTLQTPIIERENNGYLVEDDPLPHSPENFKQQLQQLVEGYERIPRN-ALRLNVN--DV----IGD 501
            :.:...|||..:   :.|:.|:       ....|.|.|..|.:|.| |..::..  ||    .|.
 Worm    87 LPVDKEIIETIS---INEETPI-------ITDYQPLNERAEYLPYNPAFEIHSEHLDVFEKQFGQ 141

  Fly   502 GRFGEI----------ITGKVSTNDFARDCTLHVLCLDDLNGTTQAQ---LLRELRQLSQLKRQE 553
            |.||::          .||:|...|        |......:.|.::|   :|.|::.:..:.:..
 Worm   142 GNFGKVNKALLKLINQKTGEVVRMD--------VAVKKPADSTDKSQDKLILDEIKLMCAIGKHP 198

  Fly   554 HLLDFYGVSASPDWFYLIFEQQR-MSLKRKLVESRL----------------------------- 588
            ::|...|.         |.:|:: :..:..||.:..                             
 Worm   199 NVLAIVGA---------ITKQEKVIGREHNLVVTEFVEGGDLRSVLKYTPYTFHDELTSTDRTGG 254

  Fly   589 -MAPSPRLTSLSEQLVLQWIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFG------ 646
             |..|.....||...:..:.|::|:.|.||::...|||.|...:|||..:..:::..||      
 Worm   255 QMVNSDIFDELSTSDLYSFAYQIANGMEYLAAKPCVHRDLALRNVFVKRNKMIRIGDFGLARHHS 319

  Fly   647 -------------PLPYMNIARQQPDHNRWLAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTP 698
                         |||..           |||||.. ::...:..:||||.....:|..:||.:|
 Worm   320 KKSYYRMQCNPDTPLPIF-----------WLAPECF-NESKFTEMTDVWSYGVCLFELFSLGESP 372

  Fly   699 YANAVAS-NQQLLEAIRAAVRPAQPAYVYGDLYQLLLNCWQLEPSER---SSCED 749
            |.....| :..::..::...|.:.|.|...::|:.:|.||.::.:.|   :.|:|
 Worm   373 YKKLHNSPSYDVVHYLKKGYRLSAPRYCNAEIYEFMLYCWNIDATLRPKFTECKD 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068
fn3 130..222 CDD:278470
TyrKc 493..746 CDD:197581 65/325 (20%)
PTKc 497..750 CDD:270623 67/324 (21%)
kin-30NP_506771.3 TyrKc 134..428 CDD:197581 66/323 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3801
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.