DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wsck and ver-1

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_497162.2 Gene:ver-1 / 175182 WormBaseID:WBGene00006894 Length:1083 Species:Caenorhabditis elegans


Alignment Length:676 Identity:142/676 - (21%)
Similarity:237/676 - (35%) Gaps:201/676 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 ARKLLLAGGAEAVLPNQ--LLDNFLIKAQV-----LKTYSSLPAFPQPEFMVQSTETQFELTDLH 211
            :|..:..|..|..:..|  |.:|.::|.:|     |:|.......|..:|.:.|.::.....|  
 Worm   518 SRSFVADGTFERKISYQVVLTENMMLKCRVGNRVALETVHVADEIPNIKFKLASNKSAIYEGD-- 580

  Fly   212 PATLYNISVRAMCKDAQVGQSECGQASIEATTEVGLPSPVPAQPKILSRTDRTVTIELS--PIRN 274
                   :|:..|    |.....|:.||         :.|.....||..|:.|...:||  .|||
 Worm   581 -------TVKLTC----VVPKLAGRCSI---------TWVHRNLSILHSTEVTEHSQLSFLYIRN 625

  Fly   275 ------------------DNGPLSKLL----VIVEY-VDNALSQP----FDAQLLG------SWQ 306
                              :|..||.:|    :|..| |....|.|    .|..:.|      .| 
 Worm   626 ATTSASGNYTCVLENQASENFSLSTILKVEPIIAPYIVKTGFSAPTGSKLDCNIDGRPPPEYQW- 689

  Fly   307 QAQQDGVPYYIAAELDYDRPEDNRTRRFVVGDGKRYGRFTNKPLDQPDAHVHISLGLVSTLEGVT 371
              .:||.||                     |.|:|.     |..::.::.::..|..        
 Worm   690 --FKDGTPY---------------------GTGRRL-----KFFEEDNSGIYQCLAT-------- 718

  Fly   372 KTMYSRGTHDQHVTSLDDFSYATFEKGQSSVVALAVTCVIFGSCLLLSLIAYFYLRYKTCRGRRL 436
                     ::..::.:.|...|..:.....|.||:  :..|..::|.......|.:|..|..:|
 Worm   719 ---------NRAGSATNSFELKTAGRSYGIFVLLAI--LALGILVILGWKISTKLGWKKNRDLKL 772

  Fly   437 TGGNTHEMTLQTPIIERENNGYLVEDDPLPHSPENFKQQLQQLVEGYERIPRNALRLNVNDVIGD 501
                     |...:|..||.        ||    |.|.|.......:.:.     .|.:.:.||.
 Worm   773 ---------LYKSLIGSENF--------LP----NGKNQFSNFNFEFHKD-----SLEILEPIGS 811

  Fly   502 GRFGEIITGKVSTNDFARDCTLHVLCLDDLNGTT----------------QAQLLRELRQLSQLK 550
            |.||.:..|                   .|.||.                |..::.||:.:|.:.
 Worm   812 GHFGVVRRG-------------------ILKGTKTVVAVKSSSYRSSIGFQKVIVEELKLMSAIP 857

  Fly   551 RQEHLLDFYGV---SASPDWFYLIFE-----------QQRMSL----KRKLVESRLMAPSPRLTS 597
            :..::|...|.   :......|::.|           |||.::    .....:..:....|...|
 Worm   858 KHPNVLALVGAITKNLRHGELYILMEYIDGGNLRDFLQQRRNVFIDELHDNFDENIPLIRPDFNS 922

  Fly   598 LSEQLVLQWIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPLPYMNIARQQPDHNR 662
            ||...::...:::|:.|.:|.:...||..||...|.::....::::.:|    :...:::....|
 Worm   923 LSTTDLVGIAHQIANGMEWLGNVPCVHGNLCCRKVLISKTKTIRITDYG----VGDRQRKSSSMR 983

  Fly   663 WLAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASNQQLLEAIRAAVRPAQPAYVYG 727
            |:|||.:.|| ..|::|||||.....:|...||||||...|..|  :|:.|:...|..||.|...
 Worm   984 WMAPEAIEHQ-MFSSKSDVWSFGICLYEIFTLGGTPYPTCVTEN--ILKHIKNGSRNLQPEYCPS 1045

  Fly   728 DLYQLLLNCWQLEPSER---SSCEDV 750
            .||.|:..||:..|.:|   |.|.::
 Worm  1046 ALYDLMQLCWRAPPQDRPKFSLCSEL 1071

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068
fn3 130..222 CDD:278470 15/74 (20%)
TyrKc 493..746 CDD:197581 69/289 (24%)
PTKc 497..750 CDD:270623 70/289 (24%)
ver-1NP_497162.2 Ig <294..331 CDD:299845
ig 576..652 CDD:278476 20/97 (21%)
IG_like 578..654 CDD:214653 21/97 (22%)
IG_like 660..731 CDD:214653 17/116 (15%)
IGc2 674..722 CDD:197706 12/93 (13%)
Pkinase_Tyr 803..1072 CDD:285015 71/295 (24%)
PTKc 807..1073 CDD:270623 70/291 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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