DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wsck and W04G5.10

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_492969.2 Gene:W04G5.10 / 173049 WormBaseID:WBGene00012270 Length:412 Species:Caenorhabditis elegans


Alignment Length:365 Identity:84/365 - (23%)
Similarity:160/365 - (43%) Gaps:47/365 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   416 LLLSL-IAYFYLRYKTCRGRRLTGGNTHE-----MTLQTPIIERENNGYLVEDDPLPHSPENFKQ 474
            |.||| :.|.:.|..|.......||:..:     :|...||    :|.|.::...:....|...:
 Worm    20 LALSLFLLYIWRRILTNSSNSDLGGSEEDVERSLLTTSLPI----SNKYDLDRTRIQTESELISE 80

  Fly   475 QLQQLV-EGYERIPRNALRLNVNDVIGDGRFGEIITGKVSTNDFARDCTLHVLCL---DDLNGTT 535
            .::.|: :.:..|....|:::..:.||.|.||.:...::...  .|:....::.:   .:::...
 Worm    81 TIKSLIGDNHLEIDPENLKISTENYIGSGFFGTVYRAELRRE--RRNSNFMIVAVKEPSNIHNIR 143

  Fly   536 QAQLL-RELRQLSQLKRQEHLLDFYGVSASPDWFYLIFEQQRMSLKRKLVESRLMAPSPRL--TS 597
            |.::| .||..:..:::..::|...||....:...:....:...|.:.|.:.:....|.:|  .|
 Worm   144 QKKILHEELNVMCSMEKHPNILSLVGVVTQRNVMIVTEYVEDGDLLKFLRKCKFDKDSVKLDEKS 208

  Fly   598 LSEQLVLQWIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPLPYMNIARQ--QPDH 660
            |.:..:..:.:::|:.|.||.....|||.|...:|.:.::..||::.||      :||:  :.|:
 Worm   209 LCKADLFSFTFQIANGMQYLERVPCVHRDLALRNVLIKNNGVLKIADFG------LARRHDKKDY 267

  Fly   661 NR-----------WLAPEVLRHQH---HHSTRSDVWSLACVAWECCALGGTPYANAVASN----- 706
            .|           |||||....:.   ...::|||||.....:|..:||.:|| |.:.||     
 Worm   268 YRTKTTDTALPIKWLAPECFEEEEEKIRFDSKSDVWSYGVCLYEIFSLGESPY-NELDSNNFAFL 331

  Fly   707 QQLLEAIRAAVRPAQPAYVYGDLYQLLLNCWQLEPSERSS 746
            |.|.:.:|.....::|.:....:|..:.:||.|.|.||.|
 Worm   332 QVLADFLRKGNTLSEPEHCAPKMYYFMKSCWNLIPEERPS 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068
fn3 130..222 CDD:278470
TyrKc 493..746 CDD:197581 65/279 (23%)
PTKc 497..750 CDD:270623 66/277 (24%)
W04G5.10NP_492969.2 PTKc 104..378 CDD:270623 66/277 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3801
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.