DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wsck and Fgfr4

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:XP_006517162.3 Gene:Fgfr4 / 14186 MGIID:95525 Length:829 Species:Mus musculus


Alignment Length:875 Identity:195/875 - (22%)
Similarity:295/875 - (33%) Gaps:291/875 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PQEAPAYYYVGCYTARTDLLHESVYAKTPQTCIEICEHQGHHYAVL-----------------AS 81
            |||.      |....|.|.|..|              .|.|.|..:                 ||
Mouse    13 PQEG------GSGAGRCDSLFPS--------------RQAHTYLYVYKRGLALQGTEPGLGCRAS 57

  Fly    82 EKCFCANVLEPQEQ-------QDEQLCNTRCLANKAQYCGGV--GVHSYYSTILTKQPGPHHLRI 137
            |.|. |.:||.|||       |..:||           ||..  |.|.|.........|    |:
Mouse    58 EPCL-APILEQQEQVLTVALGQPVRLC-----------CGRTERGRHWYKEGSRLASAG----RV 106

  Fly   138 ---SNKTENSLTLSWNAYEARKLLLAGGAEAVLPN--QLLDNFLIK------AQVLKTYSSLPAF 191
               ..:.|.:..|..:|  .|.|.||.|:..|:.|  .|:|:.|..      .:.|.:.||...:
Mouse   107 RGWRGRLEIASFLPEDA--GRYLCLARGSMTVVHNLTLLMDDSLTSISNDEDPKTLSSSSSGHVY 169

  Fly   192 PQ--PEFMVQSTETQFELTDLHPATLYNISVRAMC-------------KDAQV--GQSECGQASI 239
            ||  |.:    |..|.....||.....| :|:..|             ||.|.  |::..|...:
Mouse   170 PQQAPYW----THPQRMEKKLHAVPAGN-TVKFRCPAAGNPMPTIHWLKDGQAFHGENRIGGIRL 229

  Fly   240 -EATTEVGLPSPVPAQPKILSRTDRTVTIELS-------------------PIRNDNGPLSKLLV 284
             .....:.:.|.||:     .|...|..:|.|                   ||.....|.:...|
Mouse   230 RHQHWSLVMESVVPS-----DRGTYTCLVENSLGSIRYSYLLDVLERSPHRPILQAGLPANTTAV 289

  Fly   285 IVEYVDNALSQPFDAQLLGSW--------QQAQQDGVPYY--------------------IAAE- 320
            :...|:.......|||....|        .....||.||.                    ::|| 
Mouse   290 VGSDVELLCKVYSDAQPHIQWLKHVVINGSSFGADGFPYVQVLKTTDINSSEVEVLYLRNVSAED 354

  Fly   321 -------------LDYDR------PEDNRTRRFVVGDGKRYGRFTNKPLDQPDAHVHISLGLV-- 364
                         |.|..      ||::.|......:    .|:|       |..:::|..||  
Mouse   355 AGEYTCLAGNSIGLSYQSAWLTVLPEEDLTWTTATPE----ARYT-------DIILYVSGSLVLL 408

  Fly   365 --STLEGVTKTMYSRGTHDQHVTSLD---------DFSYATFEKGQSSVVALAVTCVIFGSCLLL 418
              ..|.||......||.:.:...::.         .||..:...|:||                |
Mouse   409 VLLLLAGVYHRQVIRGHYSRQPVTIQKLSRFPLARQFSLESRSSGKSS----------------L 457

  Fly   419 SLIAYFYLRYKTCRGRRLTGGN----THEMTLQTPIIERENNGYLVEDDPLPHSPENFKQQLQQL 479
            ||:          ||.||:...    |..:.|..|:            |||...|.:        
Mouse   458 SLV----------RGVRLSSSGPPLLTGLVNLDLPL------------DPLWEFPRD-------- 492

  Fly   480 VEGYERIPRNALRLNVNDVIGDGRFGEIITGKVSTNDFAR-DCTLHV---LCLDDLNGTTQAQLL 540
                        ||.:...:|:|.||:::..:....|.:| |.|..|   :..|:.:....|.|:
Mouse   493 ------------RLVLGKPLGEGCFGQVVRAEAFGMDPSRPDQTSTVAVKMLKDNASDKDLADLV 545

  Fly   541 RELRQLSQLKRQEHLLDFYGVSASPDWFYLIFEQQRMSLKRKLVESRLMAPSPRLT--------- 596
            .|:..:..:.|.:::::..||.......|:|.|.......|:.:.:| ..|.|.|:         
Mouse   546 SEMEVMKLIGRHKNIINLLGVCTQEGPLYVIVECAAKGNLREFLRAR-RPPGPDLSPDGPRSSEG 609

  Fly   597 SLSEQLVLQWIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPLPYMNIAR------ 655
            .||...::...|::|..|.||.|.:.:||.|.:.:|.||.|..:|::.||      :||      
Mouse   610 PLSFPALVSCAYQVARGMQYLESRKCIHRDLAARNVLVTEDDVMKIADFG------LARGVHHID 668

  Fly   656 --QQPDHNR----WLAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASNQQLLEAIR 714
              ::..:.|    |:|||.| ....::.:|||||...:.||...|||:||.....  ::|...:|
Mouse   669 YYKKTSNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGILLWEIFTLGGSPYPGIPV--EELFSLLR 730

  Fly   715 AAVRPAQPAYVYGDLYQLLLNCWQLEPSER 744
            ...|..:|.....:||.|:..||...||:|
Mouse   731 EGHRMERPPNCPSELYGLMRECWHAAPSQR 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068 22/96 (23%)
fn3 130..222 CDD:278470 27/104 (26%)
TyrKc 493..746 CDD:197581 75/277 (27%)
PTKc 497..750 CDD:270623 74/273 (27%)
Fgfr4XP_006517162.3 IGc2 77..134 CDD:197706 18/73 (25%)
Ig 184..268 CDD:386229 17/89 (19%)
Ig3_FGFR-2 291..378 CDD:143266 13/86 (15%)
PTKc_FGFR4 481..794 CDD:133230 81/322 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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