DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wsck and Fgfr3

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_001156689.1 Gene:Fgfr3 / 14184 MGIID:95524 Length:802 Species:Mus musculus


Alignment Length:617 Identity:132/617 - (21%)
Similarity:236/617 - (38%) Gaps:151/617 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 RTVTIEL------SPIRNDNGPLSKLLVIVEYVDNALSQPFDAQLLGSW--------QQAQQDGV 313
            :|.|:::      .||.....|.::..::...|:.......|||....|        .:...||.
Mouse   233 QTYTLDVLERSPHRPILQAGLPANQTAILGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGT 297

  Fly   314 PY------YIAAELDYDRPEDNRTRRFVVG--DGKRY-GRFTNKPLDQPDAHVHISLGLVSTLEG 369
            ||      :|:..::    .|.|.|...|.  ||..| .|.||                   ..|
Mouse   298 PYVTVLKSWISENVE----ADARLRLANVSERDGGEYLCRATN-------------------FIG 339

  Fly   370 VTKTMYSRGTHDQHVTSLDDFSYATFEKGQSSVVALAVTCVIFGSCLLLSLIAYFYLRYKTCRG- 433
            |.:..:....|...  :.::....|.|.|......|:...|.|...|:::.:....||....:| 
Mouse   340 VAEKAFWLRVHGPQ--AAEEELMETDEAGSVYAGVLSYGVVFFLFILVVAAVILCRLRSPPKKGL 402

  Fly   434 --------------RRLTGGNTHEMTLQTPI--IERENNG-----YLVEDDPLPHSPENFKQQLQ 477
                          |:::..:...|...||:  |.|.::|     ..|.:..||..|   |.:|.
Mouse   403 GSPTVHKVSRFPLKRQVSLESNSSMNSNTPLVRIARLSSGEGPVLANVSELELPADP---KWELS 464

  Fly   478 QLVEGYERIPRNALRLNVNDVIGDGRFGEIITGK---VSTNDFARDCTLHVLCL-DDLNGTTQAQ 538
            :            .||.:...:|:|.||:::..:   :..:..|:..|:.|..| ||......:.
Mouse   465 R------------TRLTLGKPLGEGCFGQVVMAEAIGIDKDRTAKPVTVAVKMLKDDATDKDLSD 517

  Fly   539 LLRELRQLSQLKRQEHLLDFYGVSASPDWFYLIFEQQRMSLKRKLVESR-----------LMAPS 592
            |:.|:..:..:.:.:::::..|........|::.|.......|:.:.:|           ...|.
Mouse   518 LVSEMEMMKMIGKHKNIINLLGACTQGGPLYVLVEYAAKGNLREFLRARRPPGMDYSFDACRLPE 582

  Fly   593 PRLTSLSEQLVLQWIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPLPYMNIARQQ 657
            .:||...   ::...|::|..|.||:|.:.:||.|.:.:|.||.|..:|::.||      :||..
Mouse   583 EQLTCKD---LVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFG------LARDV 638

  Fly   658 PDHN--------------RWLAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASNQQ 708
              ||              :|:|||.| ....::.:|||||...:.||...|||:||.....  ::
Mouse   639 --HNLDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV--EE 698

  Fly   709 LLEAIRAAVRPAQPAYVYGDLYQLLLNCWQLEPSERSSCEDVAFGVRQLMTSPRH------ALSF 767
            |.:.::...|..:||....|||.::..||...||:|.:.:.:...:.:::|....      ::.|
Mouse   699 LFKLLKEGHRMDKPASCTHDLYMIMRECWHAVPSQRPTFKQLVEDLDRILTVTSTDEYLDLSVPF 763

  Fly   768 DRVA-GGLDT----------------LPPYLP 782
            ::.: ||.||                |||..|
Mouse   764 EQYSPGGQDTPSSSSSGDDSVFTHDLLPPGPP 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068
fn3 130..222 CDD:278470
TyrKc 493..746 CDD:197581 70/281 (25%)
PTKc 497..750 CDD:270623 69/281 (25%)
Fgfr3NP_001156689.1 IGc2 51..110 CDD:197706
IG 52..108 CDD:214652
Ig2_FGFR 155..239 CDD:143265 2/5 (40%)
IG_like 254..349 CDD:214653 23/117 (20%)
Ig3_FGFR 262..350 CDD:143175 22/110 (20%)
PTKc_FGFR3 455..788 CDD:173652 82/361 (23%)
Pkinase_Tyr 468..744 CDD:285015 70/289 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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