DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wsck and Fgfr1

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_034336.2 Gene:Fgfr1 / 14182 MGIID:95522 Length:822 Species:Mus musculus


Alignment Length:835 Identity:159/835 - (19%)
Similarity:291/835 - (34%) Gaps:244/835 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 STILTKQPGPHHLRISNKTENSLTLSWNA-YEARKLLLAGGAEAVLPNQLLDNFLIKAQVLKTYS 186
            :|:.|.:|.|        |.......|.. .|...||       |.|..||.   ::.::.....
Mouse    16 ATLCTARPAP--------TLPEQAQPWGVPVEVESLL-------VHPGDLLQ---LRCRLRDDVQ 62

  Fly   187 SLPAFPQPEFMVQSTET-----QFELTDLHPA-----------------TLYNISVRAMCKDAQV 229
            |:........:|:|..|     :.|:.|..||                 |.::::|......::.
Mouse    63 SINWLRDGVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNVSDALPSSED 127

  Fly   230 GQSECGQASIEATTEVGLPSPVPAQP---------KILSRTDRTVTIELS-PIRNDNGPLSKLLV 284
            ...:...:|.|..|:...|:..|..|         |.|.......|::.. |......|      
Mouse   128 DDDDDDSSSEEKETDNTKPNRRPVAPYWTSPEKMEKKLHAVPAAKTVKFKCPSSGTPNP------ 186

  Fly   285 IVEYVDNALSQPFDAQLLG------SWQQAQQDGVP-----YYIAAELDYDRPEDNRTRRFVVGD 338
            .:.::.|......|.::.|      :|.......||     |....|.:|.  ..|.|.:..|.:
Mouse   187 TLRWLKNGKEFKPDHRIGGYKVRYATWSIIMDSVVPSDKGNYTCIVENEYG--SINHTYQLDVVE 249

  Fly   339 GKRYGRFTNKPLDQPDAHVHISLGLVSTLEGVTKTMYSRGTHDQ---HV---------------- 384
                 |..::|:.|.....:.::.|.|.:|.:.|.......|.|   |:                
Mouse   250 -----RSPHRPILQAGLPANKTVALGSNVEFMCKVYSDPQPHIQWLKHIEVNGSKIGPDNLPYVQ 309

  Fly   385 ---------------------TSLDDFSYATFEKGQS------------------------SVVA 404
                                 .|.:|....|...|.|                        |.:.
Mouse   310 ILKTAGVNTTDKEMEVLHLRNVSFEDAGEYTCLAGNSIGLSHHSAWLTVLEALEERPAVMTSPLY 374

  Fly   405 LAVTCVIFG----SCLLLSLIAYFYLRYKTCRGRRLTGGNT----HEMTLQTPIIERE------- 454
            |.:.....|    ||:|.|:|.     ||...|.:.:..::    |::....| :.|:       
Mouse   375 LEIIIYCTGAFLISCMLGSVII-----YKMKSGTKKSDFHSQMAVHKLAKSIP-LRRQVTVSADS 433

  Fly   455 ----NNGYL-----------------VEDDPLPHSPENFKQQLQQLVEGYERIPRNALRLNVNDV 498
                |:|.|                 |.:..||..|.            :| :||:  ||.:...
Mouse   434 SASMNSGVLLVRPSRLSSSGTPMLAGVSEYELPEDPR------------WE-LPRD--RLVLGKP 483

  Fly   499 IGDGRFGEIITG--------------KVSTNDFARDCTLHVLCLDDLNGTTQAQLLRELRQLSQL 549
            :|:|.||:::..              ||:......|.|...|          :.|:.|:..:..:
Mouse   484 LGEGCFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL----------SDLISEMEMMKMI 538

  Fly   550 KRQEHLLDFYGVSASPDWFYLIFEQQRMSLKRKLVESR-------LMAPS--PRLTSLSEQLVLQ 605
            .:.:::::..|........|:|.|.......|:.:::|       ...||  |. ..||.:.::.
Mouse   539 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE-EQLSSKDLVS 602

  Fly   606 WIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFG---PLPYMNIARQQPDHN---RWL 664
            ..|::|..|.||:|.:.:||.|.:.:|.||.|..:|::.||   .:.:::..::..:..   :|:
Mouse   603 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM 667

  Fly   665 APEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASNQQLLEAIRAAVRPAQPAYVYGDL 729
            |||.| ....::.:|||||...:.||...|||:||.....  ::|.:.::...|..:|:....:|
Mouse   668 APEAL-FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFKLLKEGHRMDKPSNCTNEL 729

  Fly   730 YQLLLNCWQLEPSERSSCEDVAFGVRQL--MTSPRHALSFDRVAGGLDTLPPYLP 782
            |.::.:||...||:|.:.:.:...:.::  :||.:..|.   ::..||...|..|
Mouse   730 YMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEYLD---LSIPLDQYSPSFP 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068
fn3 130..222 CDD:278470 21/114 (18%)
TyrKc 493..746 CDD:197581 66/281 (23%)
PTKc 497..750 CDD:270623 65/281 (23%)
Fgfr1NP_034336.2 Ig1_FGFR 40..118 CDD:143174 15/87 (17%)
IG_like 41..118 CDD:214653 15/86 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..162 6/41 (15%)
I-set 160..247 CDD:254352 16/94 (17%)
Heparin-binding 160..177 3/16 (19%)
Ig2_FGFR 163..247 CDD:143265 16/91 (18%)
IG_like 262..358 CDD:214653 12/95 (13%)
Ig3_FGFR 270..359 CDD:143175 11/88 (13%)
PTKc_FGFR1 464..765 CDD:270678 75/329 (23%)
Pkinase_Tyr 478..754 CDD:285015 66/289 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 782..822 159/835 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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