DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wsck and Ptpre

DIOPT Version :9

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:XP_038964618.1 Gene:Ptpre / 114767 RGDID:620771 Length:719 Species:Rattus norvegicus


Alignment Length:455 Identity:84/455 - (18%)
Similarity:151/455 - (33%) Gaps:163/455 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   407 VTCVIFGSCLLLSLIAYFYLRYKTCRGRRLTGGNTHEMTLQTPIIERENNGYLVEDD-------- 463
            :|.::....|||.|:|.::.|::..| :.:...|..:|.          ||.|.|.:        
  Rat    69 LTWLLLPLLLLLFLLAAYFFRFRKQR-KAVVNSNDKKMP----------NGILEEQEQQRVMLLS 122

  Fly   464 ------------PLPHSPE-----------NFKQQLQQLVEGYERIPRNALRLNVNDVIGDGRFG 505
                        |:.|..|           .|:::...|..|:  |.......|..:.....|:.
  Rat   123 RSPSGPKKYFPIPVEHLEEEIRVRSADDCKRFREEFNSLPSGH--IQGTFELANKEENREKNRYP 185

  Fly   506 EIITGKVSTNDFARDCTLHVLCLDDLNGTTQAQLL--------RELRQL--SQLKRQEHLLDFYG 560
            .|:     .||..|      :.|..|:|...:..:        :|..:.  :|..:||.:.||: 
  Rat   186 NIL-----PNDHCR------VILSQLDGIPCSDYINASYIDGYKEKNKFIAAQGPKQETVNDFW- 238

  Fly   561 VSASPDWFYLIFEQQRMSLKRKLVESRLMAPSPRLTSLSEQLVLQ----------WIY------- 608
                    .:::||:..::             ..||:|.|:...:          |.|       
  Rat   239 --------RMVWEQRSATI-------------VMLTNLKERKEEKCYQYWPDQGCWTYGNIRVCV 282

  Fly   609 -ELASAMNYLSSCQVVHRQL---CSHSVFVTS-------DFKLKLSVFGPLPYM-NIARQQPDHN 661
             :....::|......:|.||   |.....|:.       ||.:..:..|.|.:: .:....|.| 
  Rat   283 EDCVVLVDYTIRKFCIHPQLPDSCKAPRLVSQLHFTSWPDFGVPFTPIGMLKFLKKVKTLNPSH- 346

  Fly   662 RWLAPEVLRHQHHHSTRSDVWSLACVAWECCALG----GT-----PYANAVASNQQ--LLEAIRA 715
               |..::.|                    |:.|    ||     ...:.:.|.|:  :.|.: :
  Rat   347 ---AGPIVVH--------------------CSAGVGRTGTFIVIDAMMDMIHSEQKVDVFEFV-S 387

  Fly   716 AVRPAQPAYVYGD-----LYQLLLNCWQLEPSERSSCEDVAFGVRQLMTSPRHALSFDRVAGGLD 775
            .:|..:|..|..|     :||.||..:....:|.    ||:...|.|.|....|..||::  ||:
  Rat   388 RIRNQRPQMVQTDVQYTFIYQALLEYYLYGDTEL----DVSSLERHLQTLHGTATHFDKI--GLE 446

  Fly   776  775
              Rat   447  446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:280068
fn3 130..222 CDD:278470
TyrKc 493..746 CDD:197581 53/307 (17%)
PTKc 497..750 CDD:270623 52/307 (17%)
PtpreXP_038964618.1 R-PTPc-E-1 184..412 CDD:350468 49/285 (17%)
PTP_DSP_cys 499..708 CDD:421693
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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