DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp8a and Obp56d

DIOPT Version :9

Sequence 1:NP_727322.1 Gene:Obp8a / 31860 FlyBaseID:FBgn0030103 Length:163 Species:Drosophila melanogaster
Sequence 2:NP_001286619.1 Gene:Obp56d / 37266 FlyBaseID:FBgn0034470 Length:131 Species:Drosophila melanogaster


Alignment Length:152 Identity:34/152 - (22%)
Similarity:61/152 - (40%) Gaps:38/152 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RLLLLLLVVELTPPAIPVPMRSSPQSLALLRARDQ-CGRE--LTAAQRLQLDRMQFEDA-AHVRH 72
            :.|::|.|:.....|   .::.|.:..|:..|... |.::  :|..|.:.|....|:|: ..|:.
  Fly     2 KFLIVLSVILAISAA---ELQLSDEQKAVAHANGALCAQQEGITKDQAIALRNGNFDDSDPKVKC 63

  Fly    73 YLHCFWSRLQLWLDETGF------QAQRIVQSFGGERRLNVEQALPAING-CNAKTSSRGSGAQT 130
            :.:||       |::.||      |...::...|   .|..|.|:.|:.. |:|.     .||..
  Fly    64 FANCF-------LEKIGFLINGEVQPDVVLAKLG---PLAGEDAVKAVQAKCDAT-----KGADK 113

  Fly   131 VVDWCFRAFVCVLATPVGEWYK 152
             .|..::.|.|        :||
  Fly   114 -CDTAYQLFEC--------YYK 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp8aNP_727322.1 PhBP 43..144 CDD:214783 26/111 (23%)
Obp56dNP_001286619.1 PBP_GOBP 19..127 CDD:279703 30/132 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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