DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp8a and Obp56b

DIOPT Version :9

Sequence 1:NP_727322.1 Gene:Obp8a / 31860 FlyBaseID:FBgn0030103 Length:163 Species:Drosophila melanogaster
Sequence 2:NP_611443.1 Gene:Obp56b / 37265 FlyBaseID:FBgn0046880 Length:137 Species:Drosophila melanogaster


Alignment Length:140 Identity:29/140 - (20%)
Similarity:56/140 - (40%) Gaps:17/140 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RLLLLLLVVELTPPAIPVPMRSSPQSLALLRARDQCGREL----TAAQRLQLDRMQFEDAAHVRH 72
            :|:.||:|..:...:..|..:|:.:..|..:.:..|.:||    :.|..|..|:.....:..|:.
  Fly     2 KLIYLLVVFLIFALSELVAGQSAAELAAYKQIQQACIKELNIAASDANLLTTDKEVANPSESVKC 66

  Fly    73 YLHCFWSRLQLWLDETGFQAQRIVQ----SFGGERRLNVEQALPAINGCNAKTSSRGSGAQTVVD 133
            |..|.:.:|.|..|:......:||:    .|..   |.|::....:..|....|:      ...|
  Fly    67 YHSCVYKKLGLLGDDGKPNTDKIVKLAQIRFSS---LPVDKLKSLLTSCGTTKSA------ATCD 122

  Fly   134 WCFRAFVCVL 143
            :.:....||:
  Fly   123 FVYNYEKCVV 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp8aNP_727322.1 PhBP 43..144 CDD:214783 22/109 (20%)
Obp56bNP_611443.1 PhBP 35..135 CDD:214783 22/107 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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