DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk22 and scnn1b

DIOPT Version :9

Sequence 1:NP_733051.2 Gene:ppk22 / 318593 FlyBaseID:FBgn0051105 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_001072437.1 Gene:scnn1b / 779891 XenbaseID:XB-GENE-949109 Length:646 Species:Xenopus tropicalis


Alignment Length:576 Identity:112/576 - (19%)
Similarity:200/576 - (34%) Gaps:188/576 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QRLIWLLVHMATTVSLIV----VLSLTWEQF-VAQSFVTNLKDPLFPVENVPFPAVSICPNNRIS 124
            :|::|.::.: ....|:.    ||.||:..: |:.|.....|       .:.||||::|..|...
 Frog    54 KRVMWFILTL-VFAGLVFWQWGVLILTYLSYGVSVSLSIGFK-------TMEFPAVTVCNANPYK 110

  Fly   125 RQAVIQYAEELRLNSPVIRPVEYF----LERLRFFREFYTHVGVVVDTDDFITFQTFLDVFGTWN 185
            ...|          .|:::.::..    |:|::|..:...:......|:..:|....|     ||
 Frog   111 YSRV----------KPLLKDLDALVATALDRIQFSSQDQANTFTQSSTNQNVTLDPTL-----WN 160

  Fly   186 -------NET---------FFDTRRI------------------------MKMLT---PRC---- 203
                   :||         .||...|                        ||:.|   .:|    
 Frog   161 HIPLVVIDETDPSNPIVNNIFDNNAIYSKNNSFRNSSEDQTSYSQRYKVAMKLCTNNNTQCVYRN 225

  Fly   204 ------------------------------QGF-----VLKCTVANVEVPCFSKDAFQDSLTMYG 233
                                          .||     :|.|....  .||..::..:.....||
 Frog   226 FTSGIQALQEWYLLQLSSIFSNVPLADRIAMGFKAEDLILTCLFGG--QPCSYRNFTRIYDADYG 288

  Fly   234 PCCTFNMENKLKKRHFKNRLAS----SELGLKVVLNDSHVDYFAPILNTNGYIVMIHNAENYASV 294
            .|..||.     .:..::.:||    ::.|||:||:....:|...:..|....:::|...::..|
 Frog   289 NCYIFNW-----GQEGEDPMASANPGADFGLKLVLDIEQGEYLPYVQTTAAARLILHQQRSFPFV 348

  Fly   295 YSSNVLEMFPGQGEDSYIAVCARVVDTDDSLKSFSPFSRRCYFEYEAQNPIHEQLMNTYSLSYTF 359
            ....:..|   .|.::.|||   :||..:.::  :|:| .|... .:..|: :.|...::.||:.
 Frog   349 KDLGIYAM---PGTETSIAV---LVDQLEHME--APYS-SCTVN-GSDIPV-QNLYAEFNSSYSI 402

  Fly   360 PNCITRCRIRSIIALCRCLPFQMPLQLVENLDGVVYCTLGHVSCLNQYIFKW-------RNILTE 417
            .:|:..|....::..|.|..:|.||.     :|..||:       |.....|       |:.:.:
 Frog   403 QSCLRSCYQEQMVQTCGCADYQYPLP-----NGSEYCS-------NDKYPDWVPCYYGLRDSVAD 455

  Fly   418 RHIVNGLEREIEEALYCPQCLPSCRDVQYE--VSMSALP-------IDNYLATLKLDENNETEFG 473
            |.....|            |...|.|.||:  :||:..|       |.:.|:..|...:|.|...
 Frog   456 RESCISL------------CQQPCNDTQYKMVISMADWPSAGAQDWIFHVLSYEKDSSHNITVNR 508

  Fly   474 TDISVLRVYFGDPHAQYYIRLL------NNTWFEVFSTIGNIMSIFVGFSMVAIFE 523
            ..|..|.:||    .::..|.:      |..|  :.|.:|.....::|.|::.|.|
 Frog   509 NGIVRLNIYF----QEFNYRSITESEATNVVW--LLSNLGGQFGFWMGGSVLCIIE 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk22NP_733051.2 ASC 46..527 CDD:279230 112/576 (19%)
scnn1bNP_001072437.1 ENaC 27..632 CDD:273304 112/576 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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