DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk22 and Scnn1b

DIOPT Version :9

Sequence 1:NP_733051.2 Gene:ppk22 / 318593 FlyBaseID:FBgn0051105 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_036780.1 Gene:Scnn1b / 24767 RGDID:3640 Length:638 Species:Rattus norvegicus


Alignment Length:633 Identity:115/633 - (18%)
Similarity:211/633 - (33%) Gaps:202/633 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IWWIKNPKAAGEHN--SKGKRKESLGSAFCLDMADLV---RNISLQGYNKLLSPDLTLGQRLIWL 70
            :|:..|....|...  .:|.:|:::.....|..|.||   ..:.:|.|                 
  Rat    27 VWYCNNTNTHGPKRIICEGPKKKAMWFLLTLLFACLVCWQWGVFIQTY----------------- 74

  Fly    71 LVHMATTVSLIVVLSLTWEQFVAQSFVTNLKDPLFPVENVPFPAVSICPNNRISRQAVIQYAEEL 135
                           |:||..|:.|         ...:.:.||||::|      ..:..||::..
  Rat    75 ---------------LSWEVSVSLS---------MGFKTMNFPAVTVC------NSSPFQYSKVK 109

  Fly   136 RLNSPVIRPVEYFLERLRFFREFYT------------HVGVVVDTDDFITFQTFLDVFGTWNNE- 187
            .|...:.:.:|..|:::...:..:|            |..:|:..:........|::||..:|. 
  Rat   110 HLLKDLYKLMEAVLDKILAPKSSHTNTTSTLNFTIWNHTPLVLIDERNPDHPVVLNLFGDSHNSS 174

  Fly   188 ---------------------------TFFDTRRIMKMLTPRCQGFVLKCTVANVEVPCFSKDAF 225
                                       ||.:.....:.:|   :.::|:.|  |:    ||:...
  Rat   175 NPAPGSTCNAQGCKVAMRLCSANGTVCTFRNFTSATQAVT---EWYILQAT--NI----FSQVLP 230

  Fly   226 QDSLTM------------------------------YGPCCTFNMENKLKKRHFKNRLASSELGL 260
            ||.:.|                              ||.|..||.  .:.::...:....:|.||
  Rat   231 QDLVGMGYAPDRIILACLFGTEPCSHRNFTPIFYPDYGNCYIFNW--GMTEKALPSANPGTEFGL 293

  Fly   261 KVVLNDSHVDYFAPILNTNGYIVMIHNAENYASVYSSNVLEMFPGQGEDSYIAVCARVVDTDDSL 325
            |::|:....||...:.:|.|..:|:|....|..:....:..|   .|.::.|.|..      |.|
  Rat   294 KLILDIGQEDYVPFLASTAGARLMLHEQRTYPFIREEGIYAM---AGTETSIGVLL------DKL 349

  Fly   326 KS----FSPFSRRCYFEYEAQNPIHEQLMNTYSLSYTFPNCITRCRIRSIIALCRCLPFQMPLQL 386
            :.    :||.:      ....:...:.|.:.|:.:|:...|:..|....:|..|.|..:..||..
  Rat   350 QGKGEPYSPCT------MNGSDVAIQNLYSDYNTTYSIQACLHSCFQDHMIHNCSCGHYLYPLPA 408

  Fly   387 VENLDGVVYCTLGHVSCLNQYIFKWRNILTERHIVNGLEREIEEALYC-PQCLPSCRDVQYE--V 448
                 |..||.       |:....|      .:....|:..:.:...| ..|..||.|.||:  :
  Rat   409 -----GEKYCN-------NRDFPDW------AYCYLSLQMSVVQRETCLSMCKESCNDTQYKMTI 455

  Fly   449 SMSALP-------IDNYLATLKLDENNETEFGTDISVLRVYFGDPHAQYYIRLL------NNTWF 500
            ||:..|       |.:.|:..:...:|.|.....|..|.:||    .::..|.:      |..| 
  Rat   456 SMADWPSEASEDWILHVLSQERDQSSNITLSRKGIVKLNIYF----QEFNYRTIEESPANNIVW- 515

  Fly   501 EVFSTIGNIMSIFVGFSMVAIFEILFFVTKYIY----------KGCNR 538
             :.|.:|.....::|.|::.:.|....:..:|:          ||..|
  Rat   516 -LLSNLGGQFGFWMGGSVLCLIEFGEIIIDFIWITVIKLVASCKGLRR 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk22NP_733051.2 ASC 46..527 CDD:279230 102/570 (18%)
Scnn1bNP_036780.1 ENaC 21..621 CDD:273304 115/633 (18%)
deg-1 29..538 CDD:273309 109/605 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..620
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345605
Domainoid 1 1.000 111 1.000 Domainoid score I6095
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

Return to query results.
Submit another query.