DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk22 and del-4

DIOPT Version :9

Sequence 1:NP_733051.2 Gene:ppk22 / 318593 FlyBaseID:FBgn0051105 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_492230.2 Gene:del-4 / 189033 WormBaseID:WBGene00012116 Length:527 Species:Caenorhabditis elegans


Alignment Length:559 Identity:111/559 - (19%)
Similarity:189/559 - (33%) Gaps:177/559 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 RLIWLLVHMATTVSLIVVLSLTWEQFVA-----QSFVTNLKDPLFPVENVPFPAVSICPNN--RI 123
            |..|:||       ::|.::|...||:.     .||..|.:..|...|.. ||.|:||..|  ::
 Worm    36 RAFWILV-------VVVSIALFIWQFITLLTNYLSFSVNTETTLQFAERT-FPTVTICHLNPWKL 92

  Fly   124 S------------------------------------RQA---VIQYAEELRLNSPVIRPVEYFL 149
            |                                    :||   .:.|:|  |||.          
 Worm    93 SETKSVDPDMSALIDAYNSDSSSAQFGLPASLTADRQQQASKWTLMYSE--RLNE---------- 145

  Fly   150 ERLRFFREFYTHVGVVVDTDDFITFQTFLDVFGTWNNETFFDTRRIMKMLTPRCQGFVLKCTVAN 214
                  :::.....:....||.:       |..|:|.:|                     |.:.:
 Worm   146 ------KQYNDAADIAYSYDDMV-------VSCTYNAKT---------------------CNITD 176

  Fly   215 VEVPCFSKDAFQDSLTMYGPCCTFNMENKLKKRHFKNRLASSELGLKVVLNDSHVDYFAPILNTN 279
            .      .|.:..|   ||.|..||.:..     :.:..|....||::|:.... |.:.|....:
 Worm   177 F------NDFYNPS---YGNCLQFNTDGM-----YSSSRAGPLYGLRMVMRTDQ-DTYLPWTEAS 226

  Fly   280 GYIVMIHNAEN--YASVYSSNVLEMFPGQGEDSYIAVCARVVDTDDSLKSFSPFSRRCYFEYEAQ 342
            |.|:.||..:.  |..|:.     .|...|..|.:.|  ..|.|....|.:...:.:        
 Worm   227 GVIIDIHMQDEIPYPDVFG-----YFAPPGTASSLGV--SYVQTTRLSKPYGSCTTK-------- 276

  Fly   343 NPIHEQLMNT-YSLSYTFPNCITRCRIRSIIALCRCLPFQMPLQLVENLDGVVYC-----TLGHV 401
                .:|..| |:.:||...|...|....|||.|.|  :........|....|.|     ||.::
 Worm   277 ----TKLKTTHYTGTYTVEACFRSCMQEKIIASCGC--YYPAYSHASNTTQYVSCDNGVQTLSNL 335

  Fly   402 SCLNQYIFKWRNILTERHIVNGLEREIEEALYCPQCLPSCRDVQYEVSMSAL--PIDNYLATL-- 462
            :|::              ::|..:....:.|....|...|....|.|::|..  |.|:|:.|.  
 Worm   336 NCVD--------------LINSADSTEFDVLTDCDCPQPCEIDSYGVTVSTAQWPSDSYVPTECN 386

  Fly   463 ------KLDENNET---EFGTDISVLRVYFGDPHAQYYIRLLNNTWFEVFSTIGNIMSIFVGFSM 518
                  ..|.:.|:   .:..:..::.:|:...:.|........|:....|.:|..:.:|:|.|:
 Worm   387 PGGPSGPWDASGESCLDWYKANTILIEIYYERMNFQVLTESPAYTFVNFISDVGGQVGLFLGMSI 451

  Fly   519 VAIFE---ILFFVTKY--IYKGCNRMVEQNIMD-RKAKE 551
            ::..|   ::|.|..|  .:|.....:||..|| :|||:
 Worm   452 ISAIEYLVLIFLVFFYCCTHKSRRAEIEQLEMDIKKAKD 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk22NP_733051.2 ASC 46..527 CDD:279230 100/530 (19%)
del-4NP_492230.2 ASC 8..466 CDD:295594 102/533 (19%)
deg-1 14..460 CDD:273309 100/527 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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