DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk22 and del-9

DIOPT Version :9

Sequence 1:NP_733051.2 Gene:ppk22 / 318593 FlyBaseID:FBgn0051105 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_508622.2 Gene:del-9 / 182767 WormBaseID:WBGene00015957 Length:579 Species:Caenorhabditis elegans


Alignment Length:556 Identity:109/556 - (19%)
Similarity:208/556 - (37%) Gaps:170/556 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 VRNISLQGYNKLLSPDLTLGQRLIWLLVHMATTVSLIVVLSLTWE------------QFVAQSFV 97
            :|::.|....:|         |::|:|:       :|:.|.:|::            :.|...|:
 Worm    92 LRDVMLSSSGRL---------RMVWVLI-------VILALFMTFQGCYQIMDEYSMRRIVVSYFI 140

  Fly    98 TNLKDPLFPVENVPFPAVSICPNNRISRQAV------IQYAEELRLNSPVIRPVEYFLERLRFFR 156
            ..       .:::..|.|.:||.||::|..:      .:.|:.|.|:.|   .::...|.::..:
 Worm   141 QE-------AQSIWVPDVVVCPYNRLNRSFIEANNVSFELAQFLELSFP---SMDLPFENIQQQQ 195

  Fly   157 EFYTHVGVVVDTDDFITFQTFLDVFGTWNNETFFDTRRIMKMLTPRCQGFVLKCTVANVEVPCFS 221
            |      .::...|.:.||  :::....||.|:   .:.::..:..|:.|               
 Worm   196 E------EIISKIDTLDFQ--IEILLEQNNMTY---AQFLRKASLNCEAF--------------- 234

  Fly   222 KDAFQDS---------LTMYGPCCTFNMENKLKKRHFKNRLASSELGLKVVLNDSHVDYFAPILN 277
               |:||         :|..|.|  |.|..      .|..:|....|.:.|: |...:|:.|.:|
 Worm   235 ---FEDSRRCANTTEIMTSAGKC--FRMAG------IKQEIAGFGNGDRYVI-DLPEEYYNPGIN 287

  Fly   278 ---TNGYIVMIHNAENYASVYSSNVLEMFPGQGEDSYIA-------VCARVVDTDDSLKSFSPFS 332
               .:|.|:.:  ||.              |||.|:.:.       ....::.|.....:..|  
 Worm   288 QMINSGVIIKL--AER--------------GQGIDNDLTFLPAGVHAIMPLLGTQFEFMNDPP-- 334

  Fly   333 RRCYFEYEAQNPIHEQLMNTYSLSYTFPNCITRCRIRSIIALCRCLP--FQMPLQLVENLDGVVY 395
                 .||.:...|    ..||..:.|.:|:|....::    |:|.|  .|.|          .|
 Worm   335 -----RYECEEDPH----GNYSRVHCFEDCLTLDAQQT----CQCSPAAAQNP----------AY 376

  Fly   396 ----CT---LGHVSCLNQYIFKWRNILTERHIVNGLEREIEEALYCPQCLPSCRDVQY--EVSMS 451
                ||   |.|  |....:|...:.|: :.||:..::|         |...|....|  :||.|
 Worm   377 PDKLCTATQLYH--CFFTKLFPEDSNLS-KAIVDACKKE---------CKAPCHAWNYNKQVSYS 429

  Fly   452 ALPIDNYLATLKLDENNETEFGTDISVLRVYFGDPHAQYYIRLLNNTWFEVFSTIGNIMSIFVGF 516
            ::|.:   |:.||....|.|......:|.:|:.:........::......:.:.||...|:|.|.
 Worm   430 SIPSE---ASKKLLPREEWEKMKRKIILDIYYSELDYTIIKHVIAMPLSSLIAQIGGQFSLFAGG 491

  Fly   517 SMVAIFEILFFVTKYI-YKGCNRMVEQNIMDRKAKE 551
            |::::.:|:.:..:|: :|.|. :..|....|:.:|
 Worm   492 SLISLCQIVIYSVRYVMHKFCG-LKSQRRRCRETRE 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk22NP_733051.2 ASC 46..527 CDD:279230 103/528 (20%)
del-9NP_508622.2 ASC 85..502 CDD:307141 103/529 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.