DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk22 and del-8

DIOPT Version :9

Sequence 1:NP_733051.2 Gene:ppk22 / 318593 FlyBaseID:FBgn0051105 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_509617.2 Gene:del-8 / 182514 WormBaseID:WBGene00007518 Length:553 Species:Caenorhabditis elegans


Alignment Length:554 Identity:98/554 - (17%)
Similarity:179/554 - (32%) Gaps:216/554 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 TLGQRLIWLLVHM------ATTVSLIVVLSLTWEQFVAQSFVTNLKDPLFPVENVPFPAVSICPN 120
            ||..|:.|.:|.:      |.|..||::      :::.....|:....|  |:::.|||::|||.
 Worm    49 TLRMRIFWWIVIIICISLGAFTTVLIII------EYIQGPTATSTTIRL--VDSLEFPAITICPK 105

  Fly   121 NRISRQAVIQYAEELRLNSPVIRP------VEYF-----LERLR----FFREFYTHVGVVVDTDD 170
            ...|.. :.....:::.:.|.|..      :|:|     ||.:.    |.|.:.:|:.       
 Worm   106 VPDSFN-ITGLRGDIKESLPDISDKTADDLLEFFVAGSGLENMNDVTYFNRTYLSHLN------- 162

  Fly   171 FITFQTFLDVFGTWNN----ETFFDTRRIMKMLTPRCQGFVLKCTVANVEVPCFSKDAFQDSLTM 231
                    :.:..|:.    :.||:.  |.:....:|:....:|.:|...:.| ..|.....:.|
 Worm   163 --------NYYKIWSEGYSVDGFFEI--IQQKYGYKCEDLFYECQLAGKILDC-CNDLMVRRVVM 216

  Fly   232 YGPCCTFNMENKLKKRHFKNRLASSELGLKVVLNDSHVDYFAPILNTNGYIVMIHNAENYASV-- 294
            ....|....:|                     :|.|..|....|      :..:....:|.||  
 Worm   217 RRGICYQTRKN---------------------VNQSEADDIGRI------VFSLKAPTSYTSVKT 254

  Fly   295 -YSSNVLEMFPGQGEDSYIAVCARVVDTDDSLKSFSPFSRRCYFEYEAQNPIHEQLMNTYSLSYT 358
             |:...|.::              :.|..|.:..|..|                         |.
 Worm   255 NYTQTQLIVY--------------ITDNHDVVTEFPRF-------------------------YL 280

  Fly   359 FPNCITRCRIRSIIALCRCLPFQMPLQLVENLDGVVYCTLGHV-----SCLNQYIFKW--RNILT 416
            :||...|.|..:.:           ::|::| .||  || .|:     .||   :.||  .||:.
 Worm   281 YPNEWNRMRFTARL-----------IELIQN-KGV--CT-NHIFGRDAECL---VRKWYLSNIII 327

  Fly   417 ERHIV------------------------NGLER--------EIEEALYCPQCLPSCRDVQYEVS 449
            ..:..                        |.|::        |:.|     :|.|.|....|:.|
 Worm   328 PFNCTLPYLKSITKLPPTTGVCKPDVIADNYLDKIQYVWNSAEVNE-----ECTPGCNRWDYQTS 387

  Fly   450 M----SALPIDNYLATLKLDENNETEFGTDISVLRVYFGDPHAQY-YIRLLNNTWFEVF-STIGN 508
            :    :..|.::|...|:...|:                   .|| |::.:..|....| |.||.
 Worm   388 VQQSQTLSPFEDYTFNLEASFND-------------------LQYEYVKEIYTTSIPGFMSQIGG 433

  Fly   509 IMSIFVGFSMVAIFEIL--------FFVTKYIYK 534
            ....|:|.|::.:.:::        .|..|:|.:
 Worm   434 QFGFFLGLSIITLIQMVLYGFHSAFMFAKKHIQR 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk22NP_733051.2 ASC 46..527 CDD:279230 95/545 (17%)
del-8NP_509617.2 ASC 38..452 CDD:279230 95/537 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162270
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.