DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk22 and del-10

DIOPT Version :9

Sequence 1:NP_733051.2 Gene:ppk22 / 318593 FlyBaseID:FBgn0051105 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_495302.3 Gene:del-10 / 174069 WormBaseID:WBGene00020897 Length:1069 Species:Caenorhabditis elegans


Alignment Length:667 Identity:123/667 - (18%)
Similarity:223/667 - (33%) Gaps:219/667 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KAAGEHNSKGKRKESLGSAF------------------CLDMADLVRNISLQGYNKL--LSPDLT 62
            |..|::.|:...:.||||:.                  .....|..::.::...:.|  .|| :|
 Worm    30 KRVGQNRSRLNSRASLGSSMGRRITLIETDSGVIEVESDKQFLDAFKDANMDAVHHLNAASP-VT 93

  Fly    63 LGQRLIWLLVHMATTVSLIVVLSLTWEQFVAQSFVTNLKDPLFPVENVPFPAVSICPNNRISRQA 127
            .|   :|.::.:|..:.::|......:.::::...||: :..:| ..:.||.|:||.||    |.
 Worm    94 RG---LWCMIIIAFVILVLVQCYSQIKLYISEPVATNI-EAEYP-SKISFPTVAICNNN----QF 149

  Fly   128 VIQYAEELRLNSPVIRPVEYFLERLRFFREFYTHVGVVVDT--DDFITFQTFLDVFGTWNNETFF 190
            .:.|....|:.:                |...:..|.::.|  |....|.|.|.  .:|:    .
 Worm   150 RLTYLTGGRIMN----------------RRSKSISGSLLSTGHDVESVFDTVLR--KSWD----M 192

  Fly   191 DTRRIMKMLTPRCQGFVLKCTVANVEVPCFSKDAFQDSLTMYGPCCTFNMENKLKKRHFKNRLAS 255
            |..:.::.........:|.||..| ...|...| |:...|..|.|...|.:     .|....:..
 Worm   193 DAVKFLRSAAHWKSRMILGCTWPN-GTSCKLSD-FKAVWTTTGLCWAINTD-----PHNPYEVTG 250

  Fly   256 S--ELGLKVVLN-DSH--VDYFAPILNTN---GYIVMIH----------NAENYASVYSSNVLEM 302
            |  ..||:::|| :|:  ||.......|.   |..::|:          |..|..|.||.::  .
 Worm   251 SGEGHGLRLLLNVESYERVDACTKHFRTKTLPGLKILIYNQTDIPDSSMNGVNVPSGYSMDI--P 313

  Fly   303 FPGQGEDSYIAV-CARVVDTDDSLKSFSPFSRRCYFEYEAQNPIHEQLMNTYSLSYTFPNCITRC 366
            |..|.......| |  :.:.|:.:::.:.|:.                          |..|..|
 Worm   314 FKMQHRSKLTGVHC--IEENDEQIEASTDFNN--------------------------PENIRTC 350

  Fly   367 RIRSIIALCRCLPFQMPLQLVENLDGVVYCTLGHVSCLNQYIFKWRNILTERHI---VNGLEREI 428
            .:|               :.:..::...:|||......|....|.:....:::.   ...::|..
 Worm   351 TLR---------------RYMTEVENSCHCTLRRAYTSNSTDVKMKACNVDQYFGCAQKAMQRIR 400

  Fly   429 EEALYCPQCLPSCRDVQYEV--SMSALPIDNYLATL---------------KLDEN--------- 467
            ||.. ...|||.|:.:.|..  .|:.|| .|.:..|               :||||         
 Worm   401 EEGT-ASTCLPPCKSIDYTAWQDMNRLP-QNLMPALIEEQEEDDEDDVEQEELDENVSFSTVSGG 463

  Fly   468 -----NETEFGTDISVLRVYFGDPHAQY----------------YIRLLNNT----------W-F 500
                 .::.:..|..|:|:. .|.|..|                .|..|.|.          | :
 Worm   464 ETFSCEDSAYLDDKQVMRIK-RDAHRAYEMQARHQEDIFLRSRRLIARLRNAINSIERYKWGWHY 527

  Fly   501 EVFSTIGNIMSIFVGFS--------MVAIFEI------------LFFV----------TKYIYKG 535
            :.||.:.:.:|....||        :::|.|.            :||:          |:|:..|
 Worm   528 DTFSGVADRLSNLTCFSNFSERHRDIISILESRPITSEEKKANQMFFLLDETAFNRNATRYMSVG 592

  Fly   536 CNRMVEQNIMDRKAKEL 552
            ..:....:.:|..|:|:
 Worm   593 DLKSRYGDKVDDVAEEI 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk22NP_733051.2 ASC 46..527 CDD:279230 107/584 (18%)
del-10NP_495302.3 ASC 83..>419 CDD:279230 81/420 (19%)
ASC <789..849 CDD:279230
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.