DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-9 and AT1G43245

DIOPT Version :10

Sequence 1:NP_572539.2 Gene:SmydA-9 / 31859 FlyBaseID:FBgn0030102 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_001322450.1 Gene:AT1G43245 / 840925 AraportID:AT1G43245 Length:573 Species:Arabidopsis thaliana


Alignment Length:408 Identity:92/408 - (22%)
Similarity:133/408 - (32%) Gaps:142/408 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PLLIGLAAHEEDSL--NACSVCLKMLPDT---RFMCRQGCGLPVCSLCAKKKQHKSDCDLFKSWG 113
            |.|..||:...||.  :.||.|..:||.:   ...|...|.|               .|.|.: .
plant    17 PPLSPLASSLYDSFLSSHCSSCFSLLPPSPPQPLYCSAACSL---------------TDSFTN-S 65

  Fly   114 PNEPDVANSVI---IRL---LCVARAINLSKEQRDLIYCLQANLDNNHR---------TEVRNAA 163
            |..|.....::   ||.   |..:.|::.|.....|     .||..||.         ..:.:||
plant    66 PQFPPEITPILPSDIRTSLHLLNSTAVDTSSSPHRL-----NNLLTNHHLLMADPSISVAIHHAA 125

  Fly   164 KCFKNF-----PTDKKLIEIMNRTVAVLRTNGFDKTTDRTNDNQEFNYR-ALY-PLFGVVNHDCI 221
                ||     .:::|..|:....:..:.||..:     .:|:...... ||| ..|..:||.|.
plant   126 ----NFIATVIRSNRKNTELEEAAICAVLTNAVE-----VHDSNGLALGIALYNSSFSWINHSCS 181

  Fly   222 PNAYYTF---------------EEKTN--------------------NMIVRAAVDIPEGFEVTT 251
            ||:.|.|               |..:|                    .:|||:...|..|.|:|.
plant   182 PNSCYRFVNNRTSYHDVHVTNTETSSNLELQEQVCGTSLNSGNGNGPKLIVRSIKRIKSGEEITV 246

  Fly   252 TYTKLFTGNIARHLFLKMKKSFTCKCSRC--SDPTEKGAFISGLYCRDTNCTGLVVPEITGLPHP 314
            :|..|......|...|..|..|.|.|.||  |.|....:.:.|:...::                
plant   247 SYIDLLQPTGLRQSDLWSKYRFMCNCGRCAASPPAYVDSILEGVLTLES---------------- 295

  Fly   315 NWNCLVCKQKST--HAQMMKSQDFASGAINAKVNSNSLRTLVQYLNEKSDSFIPSSNYVVIDAKM 377
                    :|:|  |.....::|.|.|.:|            .|:.|..|.|: |.|   ||.|.
plant   296 --------EKTTVGHFDGSTNKDEAVGKMN------------DYIQEAIDDFL-SDN---IDPKT 336

  Fly   378 ------SVLQRLQQGRED 389
                  |||....|.:||
plant   337 CCEMIESVLHHGIQFKED 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-9NP_572539.2 SET 26..>49 CDD:394802
SET_SMYD <183..280 CDD:380997 31/133 (23%)
AT1G43245NP_001322450.1 SET_SMYD <141..275 CDD:380997 31/138 (22%)
Blue background indicates that the domain is not in the aligned region.

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