DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-9 and SDG38

DIOPT Version :10

Sequence 1:NP_572539.2 Gene:SmydA-9 / 31859 FlyBaseID:FBgn0030102 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_196280.2 Gene:SDG38 / 830550 AraportID:AT5G06620 Length:325 Species:Arabidopsis thaliana


Alignment Length:305 Identity:72/305 - (23%)
Similarity:117/305 - (38%) Gaps:55/305 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DLHLAPFKDKDPAWEIGVSKIAGRGVVATRSLKRGEIIFRDSPLLIGLAAHEEDSLNACSVCL-K 75
            |..:.|     |...:|:::.|||.|.|||.:..|::|....|::...:..:.||:  |.:|| |
plant    36 DYQIGP-----PPIRVGLTESAGRAVFATRKIGAGDLIHTAKPVVACPSLLKLDSV--CYLCLKK 93

  Fly    76 MLPDTRFMCRQGCGLPVCSL-CAKKKQHKSDCDLFKSWGPNEPDVANS-------VIIRLLCVAR 132
            ::...:|..|   |:..||. |.:..:...|.:....|...: |...:       ::.||.|:  
plant    94 LMGSAKFEDR---GVSYCSQECQENSKGFLDVETRADWSSFD-DYCRTHNFKYPLMVKRLCCM-- 152

  Fly   133 AINLSKEQRDLIYCLQ-ANLDNNHRTEVRNAA----KCFK--NFPTDKKLIEIMNRTVAVL---R 187
             |.......|.:..|| |.|.:...:::.:..    ..|:  ||..|...........|:|   |
plant   153 -IISGARPADCLDILQPAVLSSEMISKIEDGYGLLWNAFRKANFKDDDVAFLTKQWYTAILARIR 216

  Fly   188 TNGFD-------------KTTDRTNDNQEFNYRALYPLFGVVNHDCIPNAY----YTFEEKTNNM 235
            .|.|.             .....:.:.:.....|:|.|....||||.|||:    :..:.:.|.:
plant   217 INAFRIDLVGGSCGEDLLSLAAASVEGEGAVGHAVYMLPSFYNHDCDPNAHIIWLHNADARLNTL 281

  Fly   236 IVRAAVDIPEGFEVTTTYTKLFTGNIARHLFLKMKKSFTCKCSRC 280
                 .|:.||.|:...|.....|..||...|.....|.|.|.||
plant   282 -----RDVEEGEELRICYIDASMGYEARQTILSQGFGFLCNCLRC 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-9NP_572539.2 SET 26..>49 CDD:394802 9/22 (41%)
SET_SMYD <183..280 CDD:380997 28/116 (24%)
SDG38NP_196280.2 SET 43..>75 CDD:394802 11/31 (35%)
SET_SMYD <242..321 CDD:380997 23/83 (28%)

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