DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-9 and LOC4578189

DIOPT Version :10

Sequence 1:NP_572539.2 Gene:SmydA-9 / 31859 FlyBaseID:FBgn0030102 Length:500 Species:Drosophila melanogaster
Sequence 2:XP_001238168.2 Gene:LOC4578189 / 4578189 VectorBaseID:AGAMI1_000965 Length:680 Species:Anopheles gambiae


Alignment Length:358 Identity:81/358 - (22%)
Similarity:123/358 - (34%) Gaps:89/358 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PKRTSELLDLHLAPFKDK-DPAWEIGVSKIAGRGVVATRSLKRGEIIFRDSPLLIGLAAHEEDSL 67
            ||.|        .||:.. |.|.....|:..||...|..:|:..::|.|:.|....|.  :|.|.
Mosquito   244 PKGT--------RPFQPHLDGAVLYDSSETEGRFAKAKAALRPNQLILREKPHAAALL--QEYSG 298

  Fly    68 NACSVCLKMLPDTRFMCRQGCGLPVCS-LCAK---KKQHKSDCDLFKS-WGPNEPDVANSVIIRL 127
            ..||.|.:.: :..:.|.....:..|| .|.:   :..|:.:|....: |      .:.:.|:.|
Mosquito   299 THCSDCFERI-EVLYCCPHCVDVVFCSERCERNGCESYHRYECGFLGTLW------ASGATIVSL 356

  Fly   128 LCVARAINLS-----KEQRDLIYCLQANL-----DNNHRTEVRNAAKCFKNFPTDKKLIEIMNRT 182
            |.: |.|...     :|.|..:..|.|::     |:::|..........|..|.|..:..:|...
Mosquito   357 LAL-RIITQKPCAYFEEIRHELPELSASMTDKLPDDDYRKIFNLVTHSDKRTPEDNLVWTLMATM 420

  Fly   183 V-AVLRTNGFDKTTDRTN--------DNQEFNYR-----------------------ALYPLFGV 215
            : .|||...:....:..|        :.|..||.                       |||||..:
Mosquito   421 LNTVLRMANYSAAGEENNFLGYLLLHNLQVVNYNAHDVSEVQRKHANEPALSVAVGAALYPLLAL 485

  Fly   216 VNHDCIPNAYYTFEEKTNNMIVRAAVDIPEGFEVTTTYTKLFT--GNIARHLFLKMKKSFTCKCS 278
            .||.|.|.....|...|  :.||...:|..|..:...|..|:|  ....|...|.....|.|.|.
Mosquito   486 FNHSCDPGIVRYFTGTT--VHVRTIKNIAAGALIAENYGPLYTRMARSERRQSLATNYKFECGCE 548

  Fly   279 RCSD--PTEKGAFISGLYCRDTN-------CTG 302
            .|:.  ||          |.:.|       |||
Mosquito   549 ACAADWPT----------CANMNHAVIRFRCTG 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-9NP_572539.2 SET 26..>49 CDD:394802 5/22 (23%)
SET_SMYD <183..280 CDD:380997 30/130 (23%)
LOC4578189XP_001238168.2 None

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