DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-9 and Smyd4-2

DIOPT Version :10

Sequence 1:NP_572539.2 Gene:SmydA-9 / 31859 FlyBaseID:FBgn0030102 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_648574.1 Gene:Smyd4-2 / 39414 FlyBaseID:FBgn0036282 Length:663 Species:Drosophila melanogaster


Alignment Length:440 Identity:93/440 - (21%)
Similarity:151/440 - (34%) Gaps:115/440 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IGVSKIA--------GRGVVATRSLKRGEIIFRDSPLLIGLAAHEEDSL--NACSVCLKMLPDTR 81
            :|.||:.        ||.|||...|:.|:::..:.|    :||..|.|.  ..|..|.|.| .|.
  Fly   250 VGASKVVRLVETKDKGRFVVANEGLRTGDVLLFEEP----VAACLEPSYFGTHCHHCFKRL-HTP 309

  Fly    82 FMCRQGCGLPVCSL-C---AKKKQHKSDCDLFKSWGPNEPDVANSVIIRLLCVARAI-------- 134
            ..|....|:..||. |   |....|:.:|:.......:...:...:.:|:...|.::        
  Fly   310 VSCLHCSGIAFCSAQCMGEACSSYHRFECEYMDLMIGSGMSILCFIALRIFTQAPSLEQGLATAN 374

  Fly   135 ----NLSKEQRD---------------LIYCLQANL-DNNHRTEVRNAAKCFKNFPTDKKLIEIM 179
                :|...:.|               |:..||.:| ....:||..|        ||   .:|:.
  Fly   375 LLFEHLCSHEEDRQPDDYLRRALMSGFLLRILQKSLYFGRRKTEGVN--------PT---AVELQ 428

  Fly   180 NRT-----VAVLRTNGFDKTTDRTNDNQEFN-----YRA--LYPLFGVVNHDCIPNAYYTFEEKT 232
            ..|     :.||:.|.......:..:...|:     |.|  ||......||:|.|:....|..| 
  Fly   429 VATALLGLLQVLQYNAHQIYQTQVTEEHRFDGSKTVYLAAGLYGTGSYFNHECWPSTACHFVGK- 492

  Fly   233 NNMIVRAAVDIPEGFEVTTTYTKLFTGN--IARHLFLKMKKSFTCKCSRCSDPTEKGAFISGL-- 293
             .:::.|.........|...|..:|..|  ..|...|:.:.||:|.|..|.   |....:..|  
  Fly   493 -KLVLTATRPHRANELVAVNYGPIFIKNNLKERQRSLRGRYSFSCSCMACQ---ENWPLLQKLDK 553

  Fly   294 ----YCRDTNCTGLVVPEITGLPHP-----NWNCLVCKQ----KSTHAQMMKSQDFASGAINAKV 345
                :|...||:.|       |..|     :..|..|::    |.:.|:|:|.::....|..|..
  Fly   554 QVRFWCTSANCSNL-------LKFPKDLAKDVRCPRCRKNISLKESVAKMIKIEELYREAARAME 611

  Fly   346 NSNSLRTLVQYLNEKSDSF-----IPSSNYVVIDAKMSVLQRLQQGREDC 390
            ...::.. ::...|..|.|     :|..:.:|          .||....|
  Fly   612 AQKTVEA-IELFKESLDMFFQVAALPHKDTIV----------AQQSLHKC 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-9NP_572539.2 SET 26..>49 CDD:394802 10/29 (34%)
SET_SMYD <183..280 CDD:380997 25/105 (24%)
Smyd4-2NP_648574.1 BepA 87..205 CDD:443813
SET_SMYD4 249..541 CDD:380934 68/308 (22%)
zf-MYND 299..338 CDD:460312 12/39 (31%)
Blue background indicates that the domain is not in the aligned region.

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