DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-9 and Smyd4-1

DIOPT Version :10

Sequence 1:NP_572539.2 Gene:SmydA-9 / 31859 FlyBaseID:FBgn0030102 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster


Alignment Length:573 Identity:110/573 - (19%)
Similarity:187/573 - (32%) Gaps:189/573 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GRGVVATRSLKRGEIIFRDS-----PLLIGLAAHEEDSLNACSVCLKMLPDTRFMCRQGCGLPVC 93
            ||.:||..::.:|.:||.:.     ||         :.|..|..|...|......|      |.|
  Fly   226 GRYMVAKEAISKGNVIFSERASCFVPL---------EQLLICQQCAATLMSAPIPC------PNC 275

  Fly    94 S----LCAKKKQ------HKSDC-----DLFKSWG------------------------------ 113
            .    .|::|.:      ||.:|     |:.:..|                              
  Fly   276 HQRVVYCSRKCREAHSAIHKFECAAYRKDILRLLGISHLALRLLLTYIPYIRPHLQEMTSAKGMW 340

  Fly   114 ---------PNEPDVANSVIIRLLCVARAINLSKEQRDLIYCLQANLDNNHRTEVRNAAKCFKNF 169
                     |.|.:.|...:..|..|::......|:.: .:.|.|||...:..|..:....|.:.
  Fly   341 EEIMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELN-YHILCANLLQLYLKEHTDFYDQFHSL 404

  Fly   170 PT---DKKLI--EIMNRTVAVLRTNGF--DKTTDRTNDNQEF---------NYRAL--------- 209
            |.   |.:||  .::.|....|..||.  |.......:.:||         ..|.|         
  Fly   405 PASIEDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQPELWQKPRHLKRGQLHNLS 469

  Fly   210 ---------YPLFGVVNHDCIPNAYYTFEEKTNNMIVRAAVDIPEGFEVTTTYTKLFTGNIARHL 265
                     .|...:.||.|.|:....|:  ..:::..||.||.||.|:...||..:..:     
  Fly   470 HSDPITAINLPYLSLCNHACEPSIRTKFD--GCSVVNYAAKDILEGEEIFNCYTMDYRNS----- 527

  Fly   266 FLKMKKS--------FTCKCSRC--SDPTEKGAFISGLYCRDTNCTGLVVPEITGLPHPN---W- 316
             ||:::|        |.|.|::|  :||.:.........|...||....:|: ..:...|   | 
  Fly   528 -LKLQRSHPLKAIYKFECTCAKCTRTDPDQNYLSFHRYRCEKPNCRQEFLPD-AKVQQNNLRWWL 590

  Fly   317 --------NCLVCKQKSTHAQMMKSQDFA-----SGAINAKVNSNSLRTLVQYLNEKSDSFIPSS 368
                    .|.||.:         .|.||     .|.|.:..:|:..:.|.:..::.....:...
  Fly   591 RCNAEKPITCTVCHE---------LQHFAWYNEFLGLIGSSADSSKRQALFKAFDDLDKWLVDHH 646

  Fly   369 NYVVIDAKMSVLQRLQQGREDCSEELAHNTRLRYSRDITQLMDKLGLGDSLLRTHLEELLRREEE 433
            :          |:|:.      :|||.  |...|..|....:|:....|      |..::|::.|
  Fly   647 S----------LKRIM------AEELV--TACFYEIDGGTSLDEFEYED------LARIIRKQLE 687

  Fly   434 RRAKRLADEAEKQRKLAELQAKAAEADKLLEVL--QKEQSEQSEQAEPAGTAD 484
            ..|.:..|.:.:.         .|....|.:::  :|.::::.|..|..|..|
  Fly   688 GIAAQCGDNSTEY---------IARMTYLWDIIAQKKCRTDRKELLEMKGKVD 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-9NP_572539.2 SET 26..>49 CDD:394802 5/14 (36%)
SET_SMYD <183..280 CDD:380997 29/133 (22%)
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 7/25 (28%)
zf-MYND 258..298 CDD:460312 10/45 (22%)
SET <359..549 CDD:394802 43/198 (22%)

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