Protein Alignment SmydA-9 and Smyd1

DIOPT Version :10

• Sequence 1: NP_572539.2
• Gene: SmydA-9 / 31859
• FlyBaseID: FBgn0030102
• Length: 500
• Species: Drosophila melanogaster
• Sequence 2: NP_001100065.1
• Gene: Smyd1 / 297333
• RGDID: 1305105
• Length: 490
• Species: Rattus norvegicus
• Alignment Length: 544
• Identity: 115/544 - (21%)
• Similarity: 193/544 - (35%)
• Gaps: 158/544 - (29%)

  Fly    26 EIGVSKIAGRGVVATRSLKRGEIIFRDSPL-------LIGLAAH----EEDSLNACSVCLKMLPD 79
            |:..|:..|||:.||:.....::||.:...       ||....|    .::.|:.|..| |....
  Rat    10 EVFTSEGKGRGLKATKEFWAADVIFAERAYSAVVFDSLINFVCHTCFKRQERLHRCGQC-KFAHY 73

  Fly    80 TRFMCRQGCGLPVCSLCAKKKQHKSDCDLFKSWG--PNEPDVANSVIIRLLCVARAI-NLSKEQR 141
            ....|::...|          .||::|...|.:|  |||.       |||  .||.: .:.:|..
  Rat    74 CDRTCQKDAWL----------NHKNECSAIKRYGKVPNEN-------IRL--AARIMWRVEREGT 119

  Fly   142 DLIYCLQANLDN--NH--------RTEVRNAAKCFKNF--PTDKKL-IEIMNRTVAVLRTNGFDK 193
            .|......::|:  ||        :.|:|.....|..:  |..::. ::.::....|:..|||..
  Rat   120 GLTEGCLVSVDDLQNHVEHFGEEEQKELRVDVDTFLQYWPPQSQQFSMQYISHIFGVINCNGFTL 184

  Fly   194 TTDRTNDNQEFNYRA----LYPLFGVVNHDCIPNAYYTFEEKTNNMI-----------VRAAVDI 243
            :..|       ..:|    ::|..|:|||||.||....|....:..:           :||...|
  Rat   185 SDQR-------GLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKI 242

  Fly   244 PEGFEVTTTYTKLFTGNIARHLFLKMKKSFTCKCSRCSDPTEKGAFISGLYCRDTNCTGLVVPEI 308
            .||.|:|.:|......:..|...||.:..|.|.|..|....:...|::  ...|...:..||.|:
  Rat   243 SEGEELTVSYIDFLHLSEERRQQLKKQYYFDCSCEHCQKGLKDDLFLA--VKEDPKPSQEVVKEM 305

  Fly   309 TGLPHPNWNCLVCKQKSTHAQMMKSQDFASGAINAKVNSNSLRTLVQYLNEKSDSFIPSSN-YV- 371
            |..           .|.|..::.|::  :.|..:..|.      |.:...||.:.....:| ||
  Rat   306 TQF-----------SKDTLEKIDKAR--SEGLYHEVVK------LCRECLEKQEPVFADTNLYVL 351

  Fly   372 ----VIDAKMSVLQRLQQGREDCSEELAHNTRLRYSRDITQLMDKL------GLGDSLLRT---- 422
                ::...:|.||..        ||.:|     |:|.:.....||      .||.:::|.
  Rat   352 RLLSIVSEVLSYLQAF--------EEASH-----YARRMVDGYMKLYHHNNAQLGMAVMRAGLTN 403

  Fly   423 ----HLE---------------------------ELLRREEERRAKRLADEAEKQRKLAELQAKA 456
                |:|                           |.:|.:.|...:..........|:.|    |
  Rat   404 WHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE----A 464

  Fly   457 AEADKLLEVLQKEQSEQSEQAEPA 480
            |..::.::|:    :|.|.:..||
  Rat   465 ALNNQPMQVM----AEPSNEPAPA 484

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmydA-9	NP_572539.2	SET	26..>49	CDD:394802	7/22 (32%)
		SET_SMYD	<183..280	CDD:380997	30/111 (27%)
Smyd1	NP_001100065.1	SET_SMYD1	7..281	CDD:380924	71/297 (24%)
		zf-MYND	52..90	CDD:460312	9/48 (19%)