DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-9 and Smyd2

DIOPT Version :10

Sequence 1:NP_572539.2 Gene:SmydA-9 / 31859 FlyBaseID:FBgn0030102 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_081072.1 Gene:Smyd2 / 226830 MGIID:1915889 Length:433 Species:Mus musculus


Alignment Length:436 Identity:89/436 - (20%)
Similarity:153/436 - (35%) Gaps:138/436 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GRGVVATRSLKRGEIIFRDSP-----LLIGLAAH-------EEDSLNACSVCLKMLPDTRFMCRQ 86
            |||:.|.|....|:::| ..|     |.:|...|       .::.|:.|..|.:     .|.|..
Mouse    18 GRGLRALRPFHVGDLLF-SCPAYACVLTVGERGHHCECCFARKEGLSKCGRCKQ-----AFYCDV 76

  Fly    87 GCGLPVCSLCAKKKQ---HKSDCD----LFKSWGPNEPDVANSVII-------------RLLCV- 130
            .|         :|:.   ||.:|.    |.::|.|:|.....:.|:             :||.| 
Mouse    77 EC---------QKEDWPLHKLECSSMVVLGENWNPSETVRLTARILAKQKIHPERTPSEKLLAVR 132

  Fly   131 ---ARAINLSKEQRDLIYCLQANLDNNHRTEVRNAAKCFKNFPTDKKLIEIMNRTVAVLRTNGFD 192
               :....|..|::|||   |:::...|:...:     :..||....|:.:.    |.:..||| 
Mouse   133 EFESHLDKLDNEKKDLI---QSDIAALHQFYSK-----YLEFPDHSSLVVLF----AQVNCNGF- 184

  Fly   193 KTTDRTNDNQEFNY--RALYPLFGVVNHDCIPNAYYTFEEKTNNMIVRAAVDIPEGFEVTTTYTK 255
                 |.:::|.::  .|::|...::||.|.||...|:  |.....|||..:|..|.||.|:|..
Mouse   185 -----TIEDEELSHLGSAIFPDVALMNHSCCPNVIVTY--KGTLAEVRAVQEIHPGDEVFTSYID 242

  Fly   256 LFTGNIARHLFLKMKKSFTCKCSRCSDPTEKGAFISGLYCRDTNCTGLVVPEITGLPHPNWNCLV 320
            |......|:..|:....|||:|..|:...:..|.:                |:..|..|      
Mouse   243 LLYPTEDRNDRLRDSYFFTCECRECTTKDKDKAKV----------------EVRKLSSP------ 285

  Fly   321 CKQKSTHAQMMKSQDFASGAINAKVNSNSLRTLVQYLNEKSDSFIPSSNY--------------- 370
                                    ..:.::|.:|:|.....:.|..:.:|               
Mouse   286 ------------------------PQAEAIRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQE 326

  Fly   371 ----VVIDAKMSVLQRLQQGREDCSEELAHNTRLRYSRDITQLMDK 412
                |..|:.:.:|..:.|....|.........|:|.:.|.:...|
Mouse   327 KMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSK 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-9NP_572539.2 SET 26..>49 CDD:394802 6/14 (43%)
SET_SMYD <183..280 CDD:380997 31/98 (32%)
Smyd2NP_081072.1 SET_SMYD2 7..269 CDD:380979 71/285 (25%)
zf-MYND 52..90 CDD:460312 9/51 (18%)
TPR_10 388..422 CDD:463861
Blue background indicates that the domain is not in the aligned region.

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