DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-9 and Smyd4-3

DIOPT Version :10

Sequence 1:NP_572539.2 Gene:SmydA-9 / 31859 FlyBaseID:FBgn0030102 Length:500 Species:Drosophila melanogaster
Sequence 2:XP_319583.5 Gene:Smyd4-3 / 1279815 VectorBaseID:AGAMI1_007054 Length:650 Species:Anopheles gambiae


Alignment Length:466 Identity:97/466 - (20%)
Similarity:147/466 - (31%) Gaps:147/466 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GRGVVATRSLKRGEIIFRDSPLLIGLAAHEEDSLNACSVCLKMLPDTRFMCRQGCGLPV-CSLC- 96
            ||.......||...|:..:.|.:..|.  |:.||:.|:.|.|.:           .:|: |.|| 
Mosquito   240 GRFARTNTDLKPNTILLLERPHVSVLL--EDYSLDHCTHCFKRV-----------SVPIACPLCA 291

  Fly    97 ------------AKKKQHKSDCDLFK-SWGPNEPDVANSVIIRLLCVARAINLSKEQRDLIYCLQ 148
                        |....|:.:|.... .||       :...|......|.|....|:    |.|:
Mosquito   292 DVVFCSDECETKANATYHRYECGFLPILWG-------SGASITCHMALRMITQKSEE----YFLK 345

  Fly   149 -----ANLDNNH--RTEVRNAAKCFK--NFPTDKKLIEIMNRTV------AVLRTNGFDKTTDRT 198
                 |.|.|..  :..|.:..|.:|  ...:.:...:...||:      |.|...|:.......
Mosquito   346 LKPELAGLTNEQIDKLPVDDYRKVYKLVTHESTRSPEDFFQRTLMATLLNACLTLGGYGACPQEQ 410

  Fly   199 N----------DNQEFNYR---------------------ALYPLFGVVNHDCIPNA--YYTFEE 230
            |          ...:||..                     .|||...:.||.|.|..  ||    
Mosquito   411 NFIGGLLVHNLQLLQFNAHEVSEMIRETAEDIGKSTFIGGGLYPTLALFNHSCDPGVTRYY---- 471

  Fly   231 KTNNMIVRAAVDIPEGFEVTTTYTKLFT--GNIARHLFLKMKKSFTCKCSRCSDP----TEKGAF 289
            :.|.:.||...:||....|...|..|||  ....|...|..:..|||:|..|.:.    ||....
Mosquito   472 RGNQVCVRTVKNIPADSMVAENYGPLFTQVRRDERRDTLLHQYRFTCQCVPCVENWPLFTEMDPG 536

  Fly   290 I------SGLYCRDTNCTGLVVPEITGLPHPNWNCLVCKQKSTHAQMMKS----QD--------- 335
            :      ||..|.:.    |::|...     |...:.|.:...|..:||.    ||         
Mosquito   537 VIRFRCDSGKICSNV----LLIPAAV-----NDFMVKCTECGEHTNIMKGLKSLQDTDMLFKTAT 592

  Fly   336 --FASGAINAKVNSNSLRTLVQYLNEKSDSFIPS-SNYVVIDAKMSVLQRLQQGREDCSEELAHN 397
              .::|...|     :||..|:.:...|:..:|. .:|          ...|||...|..|..: 
Mosquito   593 RLHSAGEYEA-----ALRKYVEMMETMSEVLVPPYRDY----------HLCQQGLRACMLEFGN- 641

  Fly   398 TRLRYSRDITQ 408
               |::|.:.:
Mosquito   642 ---RFTRAVAK 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-9NP_572539.2 SET 26..>49 CDD:394802 4/14 (29%)
SET_SMYD <183..280 CDD:380997 31/137 (23%)
Smyd4-3XP_319583.5 None

Return to query results.
Submit another query.