DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-9 and smyd3

DIOPT Version :10

Sequence 1:NP_572539.2 Gene:SmydA-9 / 31859 FlyBaseID:FBgn0030102 Length:500 Species:Drosophila melanogaster
Sequence 2:XP_031758360.1 Gene:smyd3 / 100494527 XenbaseID:XB-GENE-854970 Length:448 Species:Xenopus tropicalis


Alignment Length:463 Identity:98/463 - (21%)
Similarity:170/463 - (36%) Gaps:115/463 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GRGVVATRSLKRGEIIFRDSPLLIGLAAHEEDSLNACSVCL----KMLPDTRFMCRQGCGLPVCS 94
            |.||.|.:.:..|..:....|.:..:...:    .||..||    |:|..::....:.|.    |
 Frog    35 GNGVRALKDMSHGLTVMIAEPYVYTVCRIK----TACDHCLHRKEKLLRCSQCKVARYCN----S 91

  Fly    95 LCAKK--KQHKSDCDLFKSWGPN------------------EPDVANSVIIRLLCVARAI-NLSK 138
            .|.:|  :.||.:|...:|..||                  :||.|:..:..:..:...| ..|:
 Frog    92 HCQRKAWQGHKRECKCLRSTLPNVPPNSVRLVGKIIFKMLQKPDTASEELYTISDLQSHIKEASE 156

  Fly   139 EQRDLIYCLQANLDNNHRTEVRNAAKCFKNFPTDKKLIEIMNRTVAVLRTNGFDKTTDRTNDNQE 203
            |.:|.:..|...|.:..:.|::..::    .|...:::|...:..|.:..|.|   |....:.|:
 Frog   157 EVKDGLRHLATALQHYLKEEIQEISQ----LPPGFQVLEYFGKVSAKVTCNSF---TISDGEMQD 214

  Fly   204 FNYRALYPLFGVVNHDCIPNAYYTFEEKTNNMIVRAAVDIPEGFEVTTTYTKLFTGNIARHLFLK 268
            ... .|||...::||.|.||....||...  :::|...:||:|.|:|.:|..:......|...|:
 Frog   215 VGV-GLYPSMSLLNHSCDPNCVIVFEGTC--LLLRTVKEIPKGEELTISYIDVKMPTQGRRDQLQ 276

  Fly   269 MKKSFTCKCSRCSDPTEKGAFISGLYCRDTNCTGLVVPEITGLPHPNWNCLVCKQKSTHAQMMKS 333
            .:..|.|.|.||....:....::|    |...:..|...::.|                 :.:.|
 Frog   277 RQYCFLCDCQRCLLRDKDEDMLAG----DAEASREVESSVSRL-----------------EELLS 320

  Fly   334 QDFASGAINAKVNSNSLRTLV-QYLNEKSDSFIPSSNYVVIDAKMSVLQRLQQGREDCSEELAHN 397
            |:.|..|:|.      .:||: :|       ::|..|..    ::.:|        ||:.:.:.:
 Frog   321 QNTAEEALNL------CKTLMNRY-------YLPDKNIY----QLKIL--------DCAMDASID 360

  Fly   398 TRLRYSRDITQLMDKLGLGDSLLRTHLEEL------LRREEERRAKRLADEAEKQRKLAELQAKA 456
                           |||.:..|...|..|      .......||.:|.    |..||...|...
 Frog   361 ---------------LGLWEEALHFGLRTLEPYSLYYSNYHPVRAVQLM----KVGKLQNYQGLF 406

  Fly   457 AEADKLLE 464
            |||.|.|:
 Frog   407 AEAMKTLK 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-9NP_572539.2 SET 26..>49 CDD:394802 5/14 (36%)
SET_SMYD <183..280 CDD:380997 27/96 (28%)
smyd3XP_031758360.1 SET_SMYD3 24..289 CDD:380980 62/271 (23%)
zf-MYND 67..105 CDD:460312 11/41 (27%)

Return to query results.
Submit another query.