DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(r) and dhodh

DIOPT Version :9

Sequence 1:NP_727320.1 Gene:su(r) / 31858 FlyBaseID:FBgn0086450 Length:1031 Species:Drosophila melanogaster
Sequence 2:NP_001008608.1 Gene:dhodh / 494065 ZFINID:ZDB-GENE-030131-3157 Length:407 Species:Danio rerio


Alignment Length:339 Identity:81/339 - (23%)
Similarity:140/339 - (41%) Gaps:64/339 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   524 DAVDISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKDLVTNVSPRIVRG 588
            |...:.|.:.|.:|:||.|:|:.......| :...:..|:|||...|. ..|....|..||:.|.
Zfish    73 DPTSLEVHVMGRKFQNPVGMAAGFDKHGEA-VDGLYRLGFGFVEVGTV-TPKPQDGNPKPRVFRL 135

  Fly   589 TTSG---YKYGPQQGCFLNIELISEK-RAEYWLKS------------IGELKRDFPEKIVIASIM 637
            .:..   .:|| ...|  .:..:.|: :|...::|            :|:.|.. |:.:      
Zfish   136 ESDQAVINRYG-FNSC--GLSAVHERLKAREHVQSELTKAGKPLGINLGKNKLS-PDAV------ 190

  Fly   638 CSFNEEDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQDPELVEQISRWVRKAVK---- 698
                 .|:.| .::.....||.|.:|:|.|:..|.|        |.:..|::...:.|.||    
Zfish   191 -----SDYVE-GVRTLGPLADYLVVNVSSPNTPGLR--------DLQGKEELRHLLDKVVKERDS 241

  Fly   699 ------LPFFIKLTPNIT--DIVSIAAAAKRGGADGGSAINTVQGLMGLKADSTAWPAIGKEQRT 755
                  .|..:|:.|::|  |...||......|.||....||...    :.|:...|     .|.
Zfish   242 LRIENRPPVLVKIAPDLTTQDKQDIAEVIMEVGVDGVMVSNTTVS----RPDTLKDP-----NRV 297

  Fly   756 TYGGVSGNATRPMALKAISDIANRVPG-FPILGIGGIDSGEVALQFIHAGATVLQICSSVQNQDF 819
            ..||:||...:.::.:.:.::.....| .||:|:||:.||:.|:..|.|||:::|:.:::..|..
Zfish   298 ETGGLSGQPLKELSTQTVREMYTLTQGKLPIVGVGGVASGQDAMDKIRAGASLVQLYTALVYQGP 362

  Fly   820 TVIEDYCTALKALL 833
            .|:......|..||
Zfish   363 PVVNKIKRELDDLL 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(r)NP_727320.1 PRK11749 55..507 CDD:236967
Fer4_20 58..170 CDD:291363
NAD_binding_8 190..>234 CDD:290186
PRK08318 527..1008 CDD:236237 80/336 (24%)
DHPD_FMN 527..829 CDD:239244 77/330 (23%)
Fer4_9 953..997 CDD:289930
dhodhNP_001008608.1 PLN02826 15..393 CDD:178421 81/339 (24%)
DHOD_2_like 44..372 CDD:240089 78/333 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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