DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(r) and dhod-1

DIOPT Version :10

Sequence 1:NP_727320.1 Gene:su(r) / 31858 FlyBaseID:FBgn0086450 Length:1031 Species:Drosophila melanogaster
Sequence 2:NP_491930.1 Gene:dhod-1 / 172392 WormBaseID:WBGene00020932 Length:411 Species:Caenorhabditis elegans


Alignment Length:364 Identity:83/364 - (22%)
Similarity:142/364 - (39%) Gaps:91/364 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   499 WSIHCQLQGLPLDTPAALPLF-YTDIDAVDISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQG 562
            |::.....||       ||.| :...:..::..|:.|..|:||.|||:.......|:.:.|...|
 Worm    67 WAVRAASWGL-------LPRFGWNRKEYPELKCELFGREFKNPIGLAAGFDKDGQAITQLAKNSG 124

  Fly   563 WGFV--------------------------VTKTFGLDKDLVTNVSPRIVRGTTSGYKYGPQQGC 601
            :|.:                          |...:|.:.|.|..|..|:.....|   :.|:...
 Worm   125 FGLIEIGSVTPIPQPGNNRPRVFRLLEDEGVINRYGFNSDGVGRVHQRVRSARDS---WVPESYA 186

  Fly   602 FLNIELISEKRAEYWLKSIGELKRDFPEKIVIASIMCSFNEEDWTELAIKAEQSGADALELNLSC 666
            :..:.|...|..|       :.|.|:                   |:.:.......|.|.||:|.
 Worm   187 YFGVNLGKNKLTE-------DAKLDY-------------------EIGVNYFAPHCDYLVLNVSS 225

  Fly   667 PHGMGERGMGLACGQDPELVEQISRWVRKAVKL-------PFFIKLTPNI--TDIVSIAAAA--K 720
            |:..|.|.|     |....:|::..:|.:|:::       ..|:|:.|::  :::..||...  |
 Worm   226 PNTPGLRSM-----QKKSDLEKLLAYVHQALEMHKLEKQPQVFLKIAPDLIESELKDIAQVVTNK 285

  Fly   721 RGGADGGSAINTVQGLMGLKADSTAWP-AIGKEQRTTYGGVSGNATRPMALKAISDIANRVPG-F 783
            :...||....||          :.|.| .:..|.:|..||:||...|.::.:.:..|.....| .
 Worm   286 KFAIDGIIVSNT----------TIARPDYLRSENKTETGGLSGAPVREISTECVRKIYKLTNGQI 340

  Fly   784 PILGIGGIDSGEVALQFIHAGATVLQICSSVQNQDFTVI 822
            ||:|.||:.||..|.:.|.|||:::|:.|:...:.|.||
 Worm   341 PIIGCGGVFSGADAYEKIRAGASLVQLYSAFVYEGFPVI 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(r)NP_727320.1 PRK11749 55..507 CDD:481254 1/7 (14%)
DHPD_FMN 527..829 CDD:239244 77/335 (23%)
NapF <887..1009 CDD:440760
Fer4_21 946..1004 CDD:434137
dhod-1NP_491930.1 DHOD_2_like 52..386 CDD:240089 83/364 (23%)
Blue background indicates that the domain is not in the aligned region.

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