Protein Alignment spn-D and Xrcc3

DIOPT Version :9

• Sequence 1: NP_733200.1
• Gene: spn-D / 318579
• FlyBaseID: FBgn0003482
• Length: 270
• Species: Drosophila melanogaster
• Sequence 2: NP_083151.1
• Gene: Xrcc3 / 74335
• MGIID: 1921585
• Length: 349
• Species: Mus musculus
• Alignment Length: 232
• Identity: 68/232 - (29%)
• Similarity: 104/232 - (44%)
• Gaps: 26/232 - (11%)

  Fly    45 KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFIDTRQD 109
            ::..|...||...|||:.|..:..|.|.|..||||:.|||||.||.|:..||||..|::|.|...
Mouse    81 RLSLGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLAVQFPRQYGGLEAGAVYICTEDA 145

  Fly   110 FHPDRLMGLALKLERQYAHRVPEFKAHKMLQKIHY------VRCPKLDQLMATVLSCHRHLVDHP 168
            |...||..| :..:|:.....||    ::::||.:      .....:|.|:..|......|:...
Mouse   146 FPSKRLWQL-IAQQRRLRTDAPE----ELIEKIRFSNHIFIEHAADVDTLLECVSKKVPILLSRG 205

  Fly   169 DIKLIVIDSLAFTLRM---LEDGAHRYEMLLELHESMRRLQRQHELTWVFTNVLTHRYVKQKFQV 230
            ..:|:|:||:|...|.   |:..|.|.::||.|..::|||........:..|.:|. .|:.:..|
Mouse   206 MARLVVVDSIAAPFRCEFHLQASAIRAKLLLSLGATLRRLSSTFRSPVLCINQVTD-MVEDQQSV 269

  Fly   231 EPALGDLHSHLINERIWFSGSSELHLGKSWRTSRLIK 267
            ..:||.....|           ...||.:|....|::
Mouse   270 SRSLGASEERL-----------SPALGITWANQLLMR 295

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-D	NP_733200.1	P-loop_NTPase	46..249	CDD:304359	64/211 (30%)
Xrcc3	NP_083151.1	Rad51_DMC1_radA	82..341	CDD:238543	68/231 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1065
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.840