Protein Alignment spn-D and xrcc3

DIOPT Version :9

• Sequence 1: NP_733200.1
• Gene: spn-D / 318579
• FlyBaseID: FBgn0003482
• Length: 270
• Species: Drosophila melanogaster
• Sequence 2: NP_001013559.1
• Gene: xrcc3 / 541414
• ZFINID: ZDB-GENE-050320-116
• Length: 352
• Species: Danio rerio
• Alignment Length: 207
• Identity: 61/207 - (29%)
• Similarity: 85/207 - (41%)
• Gaps: 34/207 - (16%)

  Fly    53 LDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFIDTRQDFHPDRLMG 117
            ||....||:.|..:.||.|.|..||||.||||||:||.|:..|||...|::|.|...|...||
Zfish    89 LDGLMRGGLPLRGITELAGESAAGKTQFCLQLCLSVQYPQEHGGLNSGAVYICTEDSFPIKRL-- 151

  Fly   118 LALKLERQYAHRVPEFKAHKMLQKIHYVR---------CPKLDQLMATVLSCHRHLVDHPDIKLI 173
                  ||...:.|..:.......||.:|         ...|:.|...|......|:....::|:
Zfish   152 ------RQLITQQPRLRPDLPPALIHSLRFSDNIYIEHAADLEALQVCVSQRVPVLLKRGLVRLL 210

  Fly   174 VIDSLAFTLR---MLEDGAHRYEMLLELHESMRRLQRQHELTWVFTNVLT------------HRY 223
            |:||:|...|   ..::...|...||....::.||...:....:..|.:|            :..
Zfish   211 VVDSVAALFRSEFQADEAVQRSRHLLAFSSTLHRLSHTYAAPVLCVNQVTDVVDGPNPGRCDYGL 275

  Fly   224 VKQKFQVEPALG 235
            |..|  |.||||
Zfish   276 VGSK--VLPALG 285

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-D	NP_733200.1	P-loop_NTPase	46..249	CDD:304359	61/207 (29%)
xrcc3	NP_001013559.1	Rad51	81..339	CDD:285604	61/207 (29%)
		Rad51_DMC1_radA	82..340	CDD:238543	61/207 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1065
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.840