Protein Alignment spn-D and Rad51c

DIOPT Version :10

• Sequence 1: NP_733200.1
• Gene: spn-D / 318579
• FlyBaseID: FBgn0003482
• Length: 270
• Species: Drosophila melanogaster
• Sequence 2: XP_038942551.1
• Gene: Rad51c / 497976
• RGDID: 1563765
• Length: 402
• Species: Rattus norvegicus
• Alignment Length: 282
• Identity: 89/282 - (31%)
• Similarity: 136/282 - (48%)
• Gaps: 32/282 - (11%)

  Fly    12 SQPEAIE-----RRPSVSHE----NFRIFDKSCWDI----SQSASNKILTGKKALDTHFGGGISL 63
            |:.||:|     ||..::::    ...:.:|.|..:    .:.....|:|...|||...||||.|
  Rat    80 SKEEALETLQILRRECLTNKPRCAGTSVANKKCTALELLEQEHTQGFIITFCSALDNILGGGIPL 144

  Fly    64 GHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFIDTRQDFHPDRLMGLA------LKL 122
            ....|:.|..|.||||:|:||.::||||:..||:.|.|:||||...|..||::.||      |.|
  Rat   145 MKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHL 209

  Fly   123 ------ERQYAHRVPEFKAHKMLQKIHYVRCPKLDQLMATVLSCHRHLVDHPDIKLIVIDSLAFT 181
                  |.:....:.:|....:|..|:|.||....:|:|.|......|.||..::|::||.:||.
  Rat   210 IAGTHTEEEQQKALKDFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSDHSKVQLVIIDGIAFP 274

  Fly   182 LRM-LEDGAHRYEMLLELHESMRRLQRQHELTWVFTNVLTHRYVKQKFQVEPALGDLHSHLINER 245
            .|. |:|...|..:|..|.:.:..|..:|.|..:.||.:|.:..|.:..:.||||:...|....|
  Rat   275 FRHDLDDLFLRTRLLNGLAQQLISLANKHRLAVILTNQMTTKIDKNQASLVPALGESWGHAATIR 339

  Fly   246 IWFSGSSELHLGKSWRTSRLIK 267
            :.|      |..:..|.:.|.|
  Rat   340 LIF------HWEQKQRFATLYK 355

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-D	NP_733200.1	Rad51C	64..260	CDD:410900	68/208 (33%)
Rad51c	XP_038942551.1	Rad51C	145..357	CDD:410900	71/217 (33%)