Protein Alignment spn-D and rad51c

DIOPT Version :10

• Sequence 1: NP_733200.1
• Gene: spn-D / 318579
• FlyBaseID: FBgn0003482
• Length: 270
• Species: Drosophila melanogaster
• Sequence 2: NP_001006101.1
• Gene: rad51c / 450081
• ZFINID: ZDB-GENE-041010-204
• Length: 362
• Species: Danio rerio
• Alignment Length: 227
• Identity: 75/227 - (33%)
• Similarity: 116/227 - (51%)
• Gaps: 10/227 - (4%)

  Fly    46 ILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFIDTRQDF 110
            |:|....||...|||:.:|...|:.|..|.||||:|:||.::||||...|||.|.||:|||...|
Zfish    86 IVTFCSGLDDAIGGGVPVGKTTEICGAPGVGKTQLCMQLAVDVQIPVFFGGLGGKALYIDTEGSF 150

  Fly   111 HPDRLMGLA---------LKLERQYAHRVPEFKAHKMLQKIHYVRCPKLDQLMATVLSCHRHLVD 166
            ...|:..:|         |..:.:....:.|....|:|..:..|||....:|:|.|......|.:
Zfish   151 LVQRVADMAEAAVQHCTLLAEDTEQKGALEELNVEKILSNLFLVRCHDYVKLLAEVYLLPDFLSE 215

  Fly   167 HPDIKLIVIDSLAFTLRM-LEDGAHRYEMLLELHESMRRLQRQHELTWVFTNVLTHRYVKQKFQV 230
            ||:::|:||||:||..|. .||.:.|..:|..|.:.:.:|..||.:..|.||.:|.|....:.::
Zfish   216 HPEVRLVVIDSIAFPFRHDFEDLSQRTRLLNGLAQQLIQLATQHRVAVVLTNQMTTRVSNGQSKL 280

  Fly   231 EPALGDLHSHLINERIWFSGSSELHLGKSWRT 262
            .||||:...|...:|:......:..|...:::
Zfish   281 VPALGESWGHAATQRLILHWEGQRRLASLYKS 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-D	NP_733200.1	Rad51C	64..260	CDD:410900	68/205 (33%)
rad51c	NP_001006101.1	Rad51C	104..313	CDD:410900	68/209 (33%)