Protein Alignment spn-D and spn-A

DIOPT Version :10

• Sequence 1: NP_733200.1
• Gene: spn-D / 318579
• FlyBaseID: FBgn0003482
• Length: 270
• Species: Drosophila melanogaster
• Sequence 2: NP_524583.1
• Gene: spn-A / 43577
• FlyBaseID: FBgn0003479
• Length: 336
• Species: Drosophila melanogaster
• Alignment Length: 243
• Identity: 69/243 - (28%)
• Similarity: 104/243 - (42%)
• Gaps: 37/243 - (15%)

  Fly    45 KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFIDTRQD 109
            ::.||.|.||...||||..|.:.|:.|....||||:|..|.:..|:|.:..|.||..::|||...
  Fly    98 QLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENT 162

  Fly   110 FHPDRLMGLALKL---ERQYAHRVPEFKAHKMLQKIHYVRCPKLDQLMATVLSCHRHLVDHPDIK 171
            |.|:||..:|.:.   |.:....|...:||...|:      .||.|:.|.:|...|:       .
  Fly   163 FRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQ------TKLIQMAAGMLFESRY-------A 214

  Fly   172 LIVIDSLAFTLRMLEDGAHRYEMLL---ELHESMRRLQR---QHELTWVFTNVLTHRYVKQKFQV 230
            |:::||.....|  .|...|.|:..   .|...:|.|||   :..:..|.||.:|     .....
  Fly   215 LLIVDSAMALYR--SDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVT-----ASLDG 272

  Fly   231 EPALGDLHSHLINERIWFSGSSELHLGKSWRTSRLIK--------ESE 270
            .|.:.|....:....:..|.::.|:|.|....:|:.|        |||
  Fly   273 APGMFDAKKPIGGHIMAHSSTTRLYLRKGKGETRICKIYDSPCLPESE 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-D	NP_733200.1	Rad51C	64..260	CDD:410900	55/204 (27%)
spn-A	NP_524583.1	recomb_RAD51	22..335	CDD:274048	69/243 (28%)