Protein Alignment spn-D and spn-B

DIOPT Version :10

• Sequence 1: NP_733200.1
• Gene: spn-D / 318579
• FlyBaseID: FBgn0003482
• Length: 270
• Species: Drosophila melanogaster
• Sequence 2: NP_476740.1
• Gene: spn-B / 41746
• FlyBaseID: FBgn0003480
• Length: 341
• Species: Drosophila melanogaster
• Alignment Length: 263
• Identity: 70/263 - (26%)
• Similarity: 118/263 - (44%)
• Gaps: 16/263 - (6%)

  Fly     6 VRVWEPSQPEAIERRPSVSHENFRIFDKSCWDISQSASNKILTGKKALDTHFGGGISLGHLVELI 70
            |||.:.:..:.:...|..:...|:......|       :::..|..|||...|||:....:.||.
  Fly    55 VRVLKDAAAKWLAEMPQSADSLFKPLVNVRW-------SRVSFGCSALDRCTGGGVVTRGITELC 112

  Fly    71 GNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFIDTRQDFHPDRLMGLALKLERQYAHRVPEFKA 135
            |.:|.||||:.|||.|.||:|:..|||.....:|.|...|...||:.::...|:::    ||.:.
  Fly   113 GAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYICTESSFPARRLLQMSKACEKRH----PEMEL 173

  Fly   136 HKMLQKIHYVRCPKLDQLMATVLSCHRHLVDHPDIKLIVIDSLAFTLRMLEDGAHRYEMLLELHE 200
            : .|..|......:.:.|:|.|::....|:....|.||:|||:|...|:..|...|...:..|.:
  Fly   174 N-FLGNIFVENHIEAEPLLACVINRIPRLMQQHGIGLIIIDSVAAIFRLYNDYLERARHMRRLAD 237

  Fly   201 SMRRLQRQHELTWVFTNVLTHRYVKQKFQVEPALGDLHSHLINERIWFSGSSELH-LGKSWRTSR 264
            ::.....::....|..|.:..|..:.:.   |.||...:||...|:..|...:.| :|....|.|
  Fly   238 ALLSYADKYNCAVVCVNQVATRDGQDEI---PCLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVR 299

  Fly   265 LIK 267
            .::
  Fly   300 KLE 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-D	NP_733200.1	Rad51C	64..260	CDD:410900	55/196 (28%)
spn-B	NP_476740.1	XRCC3	95..311	CDD:410899	62/216 (29%)