Protein Alignment spn-D and rad57

DIOPT Version :10

• Sequence 1: NP_733200.1
• Gene: spn-D / 318579
• FlyBaseID: FBgn0003482
• Length: 270
• Species: Drosophila melanogaster
• Sequence 2: NP_593627.1
• Gene: rad57 / 2542007
• PomBaseID: SPAC20H4.07
• Length: 354
• Species: Schizosaccharomyces pombe
• Alignment Length: 276
• Identity: 78/276 - (28%)
• Similarity: 117/276 - (42%)
• Gaps: 68/276 - (24%)

  Fly    39 SQSASNKILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALF 103
            |:..|..:.||...||....|||.:|.|.|:.|.||:||:|.|:||||.||:|.:.||:..:|:|
pombe    68 SKVTSKYLTTGDVKLDETLHGGIPVGQLTEICGESGSGKSQFCMQLCLMVQLPLSLGGMNKAAVF 132

  Fly   104 IDTRQDFHPDRLMGLALKLERQYAHRVPEFKAHKM-------LQKIHYVRCPKLDQLMATVLSCH 161
            |.|.......||..||..|..:|.      ||.|.       ..:::.:.||.|:.        .
pombe   133 ISTESGLETKRLFELARYLPERYP------KADKKDIIIKNPGDRVYTILCPDLES--------Q 183

  Fly   162 RHLVDH--------PDIKLIVIDSLAFTLRM-------------LEDGAHRYEMLLELHESMRRL 205
            .|::.:        ..|.|:::||:|...|.             |::.|.|...|.:|..::|.|
pombe   184 EHIIQYQLPILFNRDKIGLVILDSVASNYRAELRYNRSKSHFRDLDNIAKRGNQLGKLAMTLRTL 248

  Fly   206 QRQHELTWVFTNVLTHRYVKQKFQVEPALG----DLHSHLINERIWFSGSSEL-------HLGKS 259
            ..|||...|..|.::.|..:.    ..|:|    |..|.      ||||..:.       .||..
pombe   249 AHQHEAAVVIANQVSDRIPRD----YDAIGLFSLDYQSQ------WFSGWDDTDPNPKIPSLGLV 303

  Fly   260 WRTS-----RLIKESE 270
            |..:     .|||:::
pombe   304 WTNNISTRLALIKKTD 319

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-D	NP_733200.1	Rad51C	64..260	CDD:410900	65/234 (28%)
rad57	NP_593627.1	Rad51	22..354	CDD:462471	78/276 (28%)