DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk31 and scnn1a

DIOPT Version :9

Sequence 1:NP_001097944.1 Gene:ppk31 / 318575 FlyBaseID:FBgn0051065 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001184124.1 Gene:scnn1a / 395013 XenbaseID:XB-GENE-996083 Length:633 Species:Xenopus tropicalis


Alignment Length:530 Identity:108/530 - (20%)
Similarity:173/530 - (32%) Gaps:188/530 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MILYLVTF---YHTLPFFANVSLSLLNSYLSSSVSFNLDTIYLNWNS---TFPAITVCEI--YNA 59
            ::|:|.||   |.....       |...|.|..||.|     ||.||   .|||:|||.:  |..
 Frog    52 LVLFLATFGLMYWQFGL-------LFGQYFSYPVSIN-----LNVNSDKLPFPAVTVCTLNPYRY 104

  Fly    60 ERIW-DLSDSNFGVEHDMHVDDFISEIVFYR--GVCSSCEDCSRMR-------------CPSNFT 108
            :.|. ||.      |.|......:.|:..|.  ||........|:|             .|.:.|
 Frog   105 KAIQNDLQ------ELDKETQRTLYELYKYNSTGVQGWIPTNQRVRRDRPGLPHLLELVPPGSKT 163

  Fly   109 HLV---------DVFRTK-------CHQLLVNC---TYLNKL--------FDCCDQFLPLPTE-- 144
            |.|         .|.|.:       |::...:|   ||.:.:        |...:....:|.|  
 Frog   164 HRVSRSVIEEELQVKRREWNIGFKLCNETGGDCFYQTYTSGVDAIREWYRFHYINILARVPEEAA 228

  Fly   145 --------------------------------YGLCFSFNSHQARK----VSHLQFTNNRMT--- 170
                                            ||.|::||.:::.:    .|.:....|.:|   
 Frog   229 IDGEQLENFIFACRFNEESCTKANYSHFHHAIYGNCYTFNQNRSGQSNLWSSSMPGIKNGLTLIL 293

  Fly   171 -GPGH-----LSFHAAADIQLYVH--------APIDVP--YQFSEGMIRETV--LLGHYKELILN 217
             ...|     ||..|.|.:.::.|        :..::|  .:.|.||.:|||  :.|.|.:    
 Frog   294 RTEQHDYIPLLSSVAGARVLVHGHKEPAFMDDSGFNIPPGMETSIGMKKETVNRMGGKYSD---- 354

  Fly   218 VIEVHNDESVQDLSMEQRRCRYGHEHVPERQGIYDFYSYSGCVVECTVLLQLDNCNCTSHFMAI- 281
            ..|..:|..|::|...:                   |:...||..|.....::.|.|...|..: 
 Frog   355 CSEDGSDVDVKNLFESE-------------------YTEQVCVRSCFQAAMVERCGCGYAFYPLS 400

  Fly   282 PGQNYLPVCDVRGLICLTRIRDKIMTERKSCE--CMSSCEEP----EYNII-------------- 326
            ||..:   ||............|::.|..|.:  |.|.|.:|    ||.:.              
 Frog   401 PGDEF---CDYNKHKSWGHCYYKLIIEFTSNKLGCFSKCRKPCLVSEYQLTAGYSKWPNRVSQDW 462

  Fly   327 --------YNSADEDDEASDEVSEIRVALVELPTQRYVRRVTKTILDFLISLGGLVGLFFNTSAL 383
                    ||..|.:.     ::::.:...||..:......|..::..|..||....|:|.:|.|
 Frog   463 VFHTLSRQYNLTDRNG-----IAKLNIYFEELNYKTIQESPTINMVMLLSLLGSQWSLWFGSSVL 522

  Fly   384 RIVETIVICL 393
            .:||.:.:.:
 Frog   523 SVVEMLELVI 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk31NP_001097944.1 ASC <127..387 CDD:279230 64/355 (18%)
scnn1aNP_001184124.1 ENaC 18..602 CDD:273304 108/530 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.