DRSC/TRiP Functional Genomics Resources

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Protein Alignment nenya and Rnf212b

DIOPT Version :10

Sequence 1:NP_733236.1 Gene:nenya / 318572 FlyBaseID:FBgn0051053 Length:219 Species:Drosophila melanogaster
Sequence 2:XP_017455365.1 Gene:Rnf212b / 102550789 RGDID:7500178 Length:297 Species:Rattus norvegicus


Alignment Length:193 Identity:46/193 - (23%)
Similarity:88/193 - (45%) Gaps:31/193 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 HCNKCFRRRNVEPTLIFHMTQCQHVLCASCLSESSTDKKCPLCKRDLRAIPIDKNLPPNVAQYFE 69
            |||:|||:....    |.:|.|.|:.|..|:    |.:||.:|.|..:.:.:..||.|...::|:
  Rat     5 HCNQCFRKDGAH----FFVTSCGHIFCKKCM----TLEKCGVCGRPCKHLALSDNLKPQEKKFFK 61

  Fly    70 DPLRFQ-QLYRKISKFQADQRASDNL--GFYRQMQEHEKN-ESRLKGFCKMEAQFNQQ---IQKE 127
            .|:... |.:..:::....|:...:|  .||:   :..:| |:.:|...:..|..|::   ::||
  Rat    62 SPVETAVQCFSHVAQVWCFQKKQTDLLIAFYK---DRIRNLEAAVKEAQETAASQNKELSVLRKE 123

  Fly   128 KERIAELRAYIK-----YHEEEGLKEWPHATGVEKPWSNQARGLRPRTPS----VTTSDNTQS 181
            ...:.::.|.:|     |:...  ...|...|:..|  :|:...||.:..    |:.|.:.:|
  Rat   124 NGELKKILAILKGSPSCYYGNR--LTTPRPVGITSP--SQSAAPRPSSQHSSQVVSRSSSMES 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nenyaNP_733236.1 RING_Ubox 4..48 CDD:473075 15/42 (36%)
Rnf212bXP_017455365.1 RING-HC_RNF212B 4..40 CDD:438405 15/42 (36%)

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