DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12118 and CG42556

DIOPT Version :10

Sequence 1:NP_572537.1 Gene:CG12118 / 31857 FlyBaseID:FBgn0030101 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001162994.1 Gene:CG42556 / 8674031 FlyBaseID:FBgn0260758 Length:257 Species:Drosophila melanogaster


Alignment Length:229 Identity:58/229 - (25%)
Similarity:92/229 - (40%) Gaps:52/229 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 DLDD---DDELNSLESEPNWE---LTAERGNRFYLPNGIGPAWQG-------------------- 108
            ||||   :||    |...|.:   |.:...:.||:||.:|||:||                    
  Fly    39 DLDDMEPEDE----EGVMNHQYPILHSRHSDLFYMPNCVGPAYQGLISSLDQPYTTDCYMADEQT 99

  Fly   109 -----DSTTVGLLEPLGHLVNFHKGPNTDKSRLEFTCCKCPLLIRVPLLEIFPVPVVA-QQCINI 167
                 ||....:||.|             .:..|.....||.|:...:..:|..|... ...:|.
  Fly   100 LVKENDSIHDTILESL-------------VAPTEMCVVACPKLLLTYMRRLFQHPYARFGSSMNF 151

  Fly   168 TMLVLS-HEGDIEMGAAKFVLAAREMCDRLLSYGYWADFMNPFSGRPFFLPREGANLYRLDSRFR 231
            :|:.|. .:.|.......||..|......::..||||||:||.:||.::..........|:::..
  Fly   152 SMIGLRFKDKDANKALTSFVHFASYNSREIMDNGYWADFINPLTGRAYYRAAHCIRKQGLEAQLL 216

  Fly   232 GLNMRLSEQNRCTVISAEKNDSTRFSGTIYSTAP 265
            |..:.|:..|.||:|..|::|  :.:|.|::..|
  Fly   217 GRGLNLTFANGCTIIGEEQSD--QLTGFIFTDTP 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12118NP_572537.1 MMADHC 22..275 CDD:431154 58/229 (25%)
CG42556NP_001162994.1 MMADHC <96..248 CDD:431154 39/166 (23%)

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