DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34133 and AT1G48870

DIOPT Version :9

Sequence 1:NP_001036772.2 Gene:CG34133 / 318566 FlyBaseID:FBgn0083969 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_001319178.1 Gene:AT1G48870 / 841309 AraportID:AT1G48870 Length:593 Species:Arabidopsis thaliana


Alignment Length:562 Identity:152/562 - (27%)
Similarity:235/562 - (41%) Gaps:139/562 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   595 SDEESVIGIPPSIEGQQPDEEELE-------TEDGSRLKKKTARIKRFFGSTMRKTVDKAKSIAS 652
            ||||        :||...|:::.|       |.......||:|: |..|........||      
plant   110 SDEE--------LEGVDDDDDDSEEISSNASTSPSRSSSKKSAK-KWLFNCFSAGVKDK------ 159

  Fly   653 EVSHARHKEDVADIVDAMNPEQNIKIKASSSNKGPYEFTKLQHVQDLSGEDTSAVWCMKFSSCGR 717
                        |.....:.|...|:|..::.|...|.:....||.::|. ...:|.:|||..|:
plant   160 ------------DFKYKSSEETMSKVKVKTNKKSHVELSAAYMVQKINGH-KGKIWTLKFSPDGK 211

  Fly   718 LLATAGQDKVLRIW--VLKDAY--PFFQDMRNKYNADQKSSPTPSQESLV-----SQHSAEEAIA 773
            .|||.|:|.|::||  .|.|:.  .|.          ::..|...|.:||     :.|..|    
plant   212 YLATGGEDGVVKIWRITLSDSLLASFL----------RQQEPINQQAALVLFPQKAFHIEE---- 262

  Fly   774 MATAAEKCTGPFMPKPFCTYNGHTSDLLDVSWSKNYFILSSSMDKTVRLWHISRKECLCCFQHID 838
                          .||....|||.|:||::||.:..:||:|.|||||||.....:||..|.|.:
plant   263 --------------TPFQELYGHTGDVLDLAWSDSNLLLSASKDKTVRLWRTGCDQCLHVFHHNN 313

  Fly   839 FVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVALWNEVDGQTKLITAANFCQNGQFAVVGSYD 903
            :||.:.|:|.:...|.|||:|||.|:|.:.:::|..|.:|...   |:|.::..||...|||...
plant   314 YVTCVEFNPVNKNNFASGSIDGKARIWGLSEERVVAWTDVRDS---ISAISYQPNGNGFVVGCIT 375

  Fly   904 GRCIFYN--TDQLKYHTQIHVRSTRGKNRIGRKISGIEPMPG-EDKILVTSNDSRVRLYDLRDLN 965
            |.|.||.  .:.:....||.:   ||:||    |:.:|..|| .:||||:|.||:||::|  ...
plant   376 GNCRFYQILDNDVIMDEQILI---RGRNR----ITAVEFCPGSSEKILVSSEDSKVRIFD--KTQ 431

  Fly   966 LSCKYKGYLNVSSQIKGSF-SHDGKYIIAGSENQCIYIW-----------KTNHDY--------- 1009
            :..|:|...|...|...|| |..||:|::......:|:|           |::..:         
plant   432 MIHKFKAPSNFGRQSSASFVSSTGKHILSVRRGVGVYLWNNDAFPSRKGAKSSRSFEYFHSPGVS 496

  Fly  1010 ---------SKLSSVRRDRSDFWEGIK----AHNATVTCAIFAPHPEAIIKPEPDEISNEKLAHN 1061
                     :|:|.|..|..:....::    :...:.:|.:.|..||            |||..|
plant   497 AVAAWTQPETKVSKVAGDDEESRRVMRKIQSSGRLSRSCRVTATWPE------------EKLLMN 549

  Fly  1062 QPD-----PLVE-QHKKGCGYVLVSADFNGAIKVFINKTKPK 1097
            ...     |:.| ...:....|:|:...:|.|:.|.|...|:
plant   550 VGSYDSNLPVGEFDLAEAWRLVIVTVSLDGMIRTFHNYGLPR 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34133NP_001036772.2 WD40 repeat 663..700 CDD:293791 8/36 (22%)
WD40 704..1101 CDD:225201 127/446 (28%)
WD40 704..1046 CDD:295369 114/387 (29%)
WD40 repeat 707..765 CDD:293791 20/66 (30%)
WD40 repeat 800..834 CDD:293791 16/33 (48%)
WD40 repeat 841..878 CDD:293791 14/36 (39%)
WD40 repeat 885..920 CDD:293791 11/36 (31%)
WD40 repeat 935..975 CDD:293791 16/40 (40%)
WD40 repeat 978..1003 CDD:293791 8/25 (32%)
WD40 repeat 1034..1069 CDD:293791 10/40 (25%)
AT1G48870NP_001319178.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0283
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1332590at2759
OrthoFinder 1 1.000 - - FOG0001775
OrthoInspector 1 1.000 - - otm2463
orthoMCL 1 0.900 - - OOG6_102303
Panther 1 1.100 - - O PTHR14221
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X637
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.820

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