DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34133 and AT5G54200

DIOPT Version :9

Sequence 1:NP_001036772.2 Gene:CG34133 / 318566 FlyBaseID:FBgn0083969 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_200231.1 Gene:AT5G54200 / 835508 AraportID:AT5G54200 Length:825 Species:Arabidopsis thaliana


Alignment Length:803 Identity:216/803 - (26%)
Similarity:361/803 - (44%) Gaps:177/803 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 RDDFVME-------FESSLNNATSSASNITLTCSSTNTVVSASASTSAASSSLPSTIAIHM---- 388
            ::|.|.|       |..||:...||.|     ||::|:...:..:.|.:... |:...:.|    
plant    21 KEDKVEEEDNNDDCFYESLDRVLSSCS-----CSTSNSDYDSDPNVSDSIHD-PTPFPVPMFTSG 79

  Fly   389 ----RPMVASVTIAGPKLTQSLGSS-------STSVHSKPSPSNSAKSNSAPARVSSIDPNQGLN 442
                :....||:....:|.:.||.|       ::.:.|:...::|..|.|.|:.|.:.:.:....
plant    80 FELWKSEPESVSERRIRLLRGLGLSNEPDLPPASQLRSRSRRNSSHFSRSVPSDVLTSNHHGKCV 144

  Fly   443 LFKAIQGGYVVKPRDEASNKAQGP--SQDEIERIEKMLMESANRPKLAGTGSNSLGSSTRYPGFY 505
            |...:.|      .|....:..|.  ..|.::.|.|..||.:                      .
plant   145 LRSDVSG------TDNVDREYTGSRMRNDGVDFISKEPMERS----------------------L 181

  Fly   506 RGVNDKERRKSAGDEDVLKQMNIYVRTRTSSGKQLTDFEILEQVPVKNLDTGENMPLSEMRSPPV 570
            |.:.:||.    |.:.||::                     :...::|||||....::|:|...:
plant   182 RDIVEKEN----GRDVVLEE---------------------QMCTIRNLDTGREFVVNEVREDGM 221

  Fly   571 PEGWNPLSLHILKLTSHLEVIQKESDEESVIGIPP---------SIEGQQPDEEELETE-DGSRL 625
            .|       .:.::.:..::..:|.  |..:|..|         ::|....|..:|:|. .|||:
plant   222 LE-------RLKEVGTDRQLTLEEF--EICVGTSPIVLELMRRQNVEDVCKDSVDLDTNVSGSRV 277

  Fly   626 KKKTARIKRFFGSTMRKTVDKAKSIASEVSHARHKEDVAD-----------IVDAMNPEQNI--- 676
            .|...|     ||.::    ..|::||.|:..:.:....|           ...|.:..:::   
plant   278 TKHRRR-----GSWLK----SIKNVASSVTGYKERRSTDDRDSPSERGGQRFSSATDDSRDMSFH 333

  Fly   677 ---KIKASSSNKGPYEFTKLQHVQDLSGEDTSAVWCMKFSSCGRLLATAGQDKVLRIWVLKDAYP 738
               ::|.....|...|.|.|...|::.....| :|.:|||..||.||:||:|.|::||.:.::  
plant   334 DPERVKVRQYGKSCKELTALFKSQEIQAHKGS-IWSIKFSLDGRYLASAGEDCVIQIWKVVES-- 395

  Fly   739 FFQDMRNKYNADQKS-----------------SPTPSQESLVSQHSAEEAIAMATAAEKCTGPFM 786
              :......:.|::.                 |.:|.:....|......::......|...| ..
plant   396 --ERKGELLSMDKQEDGSINLFLLANGSPEPVSMSPKRRGRTSFSRKSVSLDNVLVPEAVFG-LS 457

  Fly   787 PKPFCTYNGHTSDLLDVSWSKNYFILSSSMDKTVRLWHISRKECLCCFQHIDFVTAIAFHPRDDR 851
            .||.|::.||..|:||:||||:..:||||||||||||.:|.|.||..|.|.|:||.|.|:|.||.
plant   458 EKPVCSFVGHLDDVLDLSWSKSQHLLSSSMDKTVRLWDLSSKTCLKVFSHSDYVTCIQFNPVDDN 522

  Fly   852 YFLSGSLDGKLRLWNIPDKKVALWNEVDGQTKLITAANFCQNGQFAVVGSYDGRCIFYNT--DQL 914
            ||:|||||.|:|:|:|||.:|..||::.   :::|||.:..:||.|:||||.|.|..|||  ::|
plant   523 YFISGSLDAKVRIWSIPDHQVVDWNDLH---EMVTAACYTPDGQGALVGSYKGTCCLYNTHDNKL 584

  Fly   915 KYHTQIHVRSTRGKNRIGRKISGIEPMPG-EDKILVTSNDSRVRLYDLRDLNLSCKYKGYLNVSS 978
            :...:|:::: |.|....:||:|.:.:.| ..::||||.|||.|:.|  .::|..|:||:.|.:|
plant   585 QQRREINLKN-RKKKTHHKKITGFQFVAGSSSEVLVTSADSRTRVVD--GVDLVHKFKGFRNTNS 646

  Fly   979 QIKGSFSHDGKYIIAGSENQCIYIWKTNHDYSKLSSVRRDRSDFWEGIKAHNATVTCAI--FAPH 1041
            ||..|.:.:||::::.||:..:|:|  |:|    |..|..||        ...|||.:.  |...
plant   647 QISASLTSNGKFLVSASEDSNVYVW--NYD----SDSRAGRS--------KRVTVTNSYENFYCR 697

  Fly  1042 PEAIIKPEPDEISNEKLAHNQPD 1064
            ..::..|.|.:|||.. .:|.|:
plant   698 DVSVAAPWPGKISNNH-TNNSPE 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34133NP_001036772.2 WD40 repeat 663..700 CDD:293791 8/53 (15%)
WD40 704..1101 CDD:225201 139/383 (36%)
WD40 704..1046 CDD:295369 132/363 (36%)
WD40 repeat 707..765 CDD:293791 17/74 (23%)
WD40 repeat 800..834 CDD:293791 22/33 (67%)
WD40 repeat 841..878 CDD:293791 22/36 (61%)
WD40 repeat 885..920 CDD:293791 16/36 (44%)
WD40 repeat 935..975 CDD:293791 16/40 (40%)
WD40 repeat 978..1003 CDD:293791 9/24 (38%)
WD40 repeat 1034..1069 CDD:293791 9/33 (27%)
AT5G54200NP_200231.1 WD40 356..672 CDD:421866 123/329 (37%)
WD40 repeat 366..404 CDD:293791 14/41 (34%)
WD40 repeat 410..466 CDD:293791 8/56 (14%)
WD40 repeat 471..505 CDD:293791 22/33 (67%)
WD40 repeat 512..548 CDD:293791 21/35 (60%)
WD40 repeat 553..639 CDD:293791 34/88 (39%)
WD40 repeat 647..673 CDD:293791 9/27 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 64 1.000 Domainoid score I3662
eggNOG 1 0.900 - - E1_KOG0283
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 221 1.000 Inparanoid score I1203
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1332590at2759
OrthoFinder 1 1.000 - - FOG0001775
OrthoInspector 1 1.000 - - otm2463
orthoMCL 1 0.900 - - OOG6_102303
Panther 1 1.100 - - O PTHR14221
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X637
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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