DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34133 and WDR13

DIOPT Version :10

Sequence 1:NP_001036772.2 Gene:CG34133 / 318566 FlyBaseID:FBgn0083969 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_060353.2 Gene:WDR13 / 64743 HGNCID:14352 Length:485 Species:Homo sapiens


Alignment Length:295 Identity:63/295 - (21%)
Similarity:106/295 - (35%) Gaps:87/295 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   784 PFMPKPFCTYNGHTSDLLDVSWS-KNYFILSSSMDKTVRLWHISRKEC------------LCCFQ 835
            |..|.......|||..:.|.:|| .|..::|:|:|.|:|:|......|            |||  
Human   204 PAPPTVLRVLRGHTRGVSDFAWSLSNDILVSTSLDATMRIWASEDGRCIREIPDPDSAELLCC-- 266

  Fly   836 HIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNI-PDKKVALWNEVDGQTKL---ITAANFCQNGQF 896
                    .|.|.::...:.|:....:.:.|| ..|||.     .|.:||   :.|.:|...|:.
Human   267 --------TFQPVNNNLTVVGNAKHNVHVMNISTGKKVK-----GGSSKLTGRVLALSFDAPGRL 318

  Fly   897 AVVGSYDGRCIFYNTD----------QLKYHTQIHVRSTRGKNRIGRKISGIEPMPGEDKILVTS 951
            ...|...|....:..|          :|..|....|.|...::.:.|:..       :..:|:.:
Human   319 LWAGDDRGSVFSFLFDMATGKLTKAKRLVVHEGSPVTSISARSWVSREAR-------DPSLLINA 376

  Fly   952 NDSRVRLYDLRDLNLSCKYKGYLNVSSQIKGSF-----SH-------------DGKYIIAGSENQ 998
            ..:::.||.:.|      .:|.|    |:|.||     ||             .|..::.|||:.
Human   377 CLNKLLLYRVVD------NEGTL----QLKRSFPIEQSSHPVRSIFCPLMSFRQGACVVTGSEDM 431

  Fly   999 CIYIWKTNHDYSKLSSVRRDRSDFWEGIKAHNATV 1033
            |::.:          .|.|........::.|:|.|
Human   432 CVHFF----------DVERAAKAAVNKLQGHSAPV 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34133NP_001036772.2 WD40 repeat 663..700 CDD:293791
WD40 704..1046 CDD:475233 63/295 (21%)
WD40 repeat 707..765 CDD:293791
WD40 repeat 800..834 CDD:293791 13/46 (28%)
WD40 repeat 841..878 CDD:293791 8/37 (22%)
WD40 repeat 885..920 CDD:293791 8/44 (18%)
WD40 repeat 935..975 CDD:293791 5/39 (13%)
WD40 repeat 978..1003 CDD:293791 11/42 (26%)
WD40 repeat 1034..1069 CDD:293791 63/295 (21%)
WDR13NP_060353.2 WD 1 162..202
WD40 <172..483 CDD:441893 63/295 (21%)
WD 2 208..246 13/37 (35%)
WD40 repeat 221..258 CDD:293791 11/36 (31%)
WD 3 250..290 7/49 (14%)
WD40 repeat 263..300 CDD:293791 11/51 (22%)
WD 4 295..335 10/44 (23%)
WD40 repeat 308..347 CDD:293791 6/38 (16%)
WD 5 341..389 9/60 (15%)
WD40 repeat 354..400 CDD:293791 12/62 (19%)
WD 6 394..438 11/53 (21%)
WD40 repeat 408..450 CDD:293791 7/51 (14%)
WD 7 444..482 3/13 (23%)
WD40 repeat 456..480 CDD:293791 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.