DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34133 and SPOM_SPBC18H10.05

DIOPT Version :10

Sequence 1:NP_001036772.2 Gene:CG34133 / 318566 FlyBaseID:FBgn0083969 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_595729.1 Gene:SPOM_SPBC18H10.05 / 2540832 PomBaseID:SPBC18H10.05 Length:586 Species:Schizosaccharomyces pombe


Alignment Length:606 Identity:163/606 - (26%)
Similarity:258/606 - (42%) Gaps:137/606 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   518 GDEDVLKQMNIYVRTR------TSSG------KQLTDFEILEQVPVKNLDTGENMPLSEMRSPPV 570
            |.||     |:.|.:|      :.||      |..||.|.....||:.|.|         ||...
pombe     9 GRED-----NVSVHSREVSVNGSDSGTGNDAYKLETDDEHPPATPVRGLST---------RSQKR 59

  Fly   571 PEGWNPLSLHILKLTSHLEVIQKESDEE--------------SVIGIPPS----IEGQQPDEEEL 617
            |  :.||:            ||::.|.|              |::..|..    .|...|:.|:|
pombe    60 P--FRPLT------------IQQDEDVENDTGMNTEYNDDNSSLVNTPRDSTTYAETNSPNTEKL 110

  Fly   618 ETEDGSRLKKKTARIKRFFGSTMRKTVDKAKSIASEVSHARHKEDVADIVDAMNPEQNIKIKAS- 681
            ...|..|              ::...:|:     .|:...|.:..|......| |::.|.:... 
pombe   111 AGRDDDR--------------SLLNLIDR-----GEIDSKRQRHYVPVHCKRM-PKKEITLNQKL 155

  Fly   682 --SSNKGPYEFTKLQHV------QDLSGEDTSAVWCMKFSSCGRLLATAGQDKVLRIWVLKDAYP 738
              |...||.:..|.:.:      |....:...:||..:.|..|:.|||||:|.::|:|       
pombe   156 YVSQVIGPADAPKSKTIFGKRIMQWEPSQFKESVWASEISKSGKYLATAGKDAIIRVW------- 213

  Fly   739 FFQDMRNKYNADQKSSPTPSQESLVSQHSAEEAIAMATAAEKCTGPFMPKPFCTYNGHTSDLLDV 803
                         |...||.:...:.:...:......|.    :..|.|:|.....||.:::|.:
pombe   214 -------------KVIETPERRETLLKEGPQSCGRFFTP----SSIFEPEPVLECVGHNAEVLSI 261

  Fly   804 SWSKNYFILSSSMDKTVRLWHISRKECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIP 868
            |||||.|:|:||.|:||||||....:.|..|:|.:.||.:||||.|||||:|||||.|::||:|.
pombe   262 SWSKNDFLLTSSADRTVRLWHPKSTKSLAVFRHNEIVTCVAFHPIDDRYFVSGSLDCKIQLWSIL 326

  Fly   869 DKKVALWNEVDGQTKLITAANFCQNGQFAVVGSYDGRCIFYNTDQLKYHTQ--IHVRSTRGKNRI 931
            ..|:..|.|::   .:::...|..:|:..|||.:.|.|..|.|..|:|.:.  ||...:|.|.  
pombe   327 RHKILHWTELE---YVVSTICFYPDGESIVVGMFYGLCAIYETKNLQYVSSWLIHHSPSRNKK-- 386

  Fly   932 GRKISGIE---PMPGEDK----ILVTSNDSRVRLYDLRDLNLSCKYKGYLNVSSQIKGSFSHDGK 989
             .:::|::   .:|.:.|    :||::||:.:|||:.....|..|......|:.::....|.|..
pombe   387 -CRVTGLQCASIIPNDSKSDNVVLVSTNDNAIRLYNTVTHALVLKLSDAHRVNGRVLSRLSEDNS 450

  Fly   990 YIIAGSENQCIYIWKTNHDYSK-LSSVRRDRSDF----WEGIKAHNATVTCAIFAPHPEAIIKPE 1049
            |||:||:...:.:|   |..:| |.:..|.||..    .|..|..:..:|..|.||...|:   |
pombe   451 YIISGSDTNEVVLW---HIPNKVLINASRKRSVILHLPTETFKVCSERLTSTIIAPARTAV---E 509

  Fly  1050 PDEISNEKLAHNQPDPLVEQH 1070
            ..|..:::....:...||:.|
pombe   510 AKESEHDRSLIAEGYNLVKPH 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34133NP_001036772.2 WD40 repeat 663..700 CDD:293791 9/45 (20%)
WD40 704..1046 CDD:475233 113/355 (32%)
WD40 repeat 707..765 CDD:293791 15/57 (26%)
WD40 repeat 800..834 CDD:293791 18/33 (55%)
WD40 repeat 841..878 CDD:293791 21/36 (58%)
WD40 repeat 885..920 CDD:293791 11/36 (31%)
WD40 repeat 935..975 CDD:293791 12/46 (26%)
WD40 repeat 978..1003 CDD:293791 7/24 (29%)
WD40 repeat 1034..1069 CDD:293791 9/34 (26%)
SPOM_SPBC18H10.05NP_595729.1 WD40 <186..472 CDD:441893 102/318 (32%)
WD40 repeat 189..253 CDD:293791 19/87 (22%)
WD40 repeat 259..293 CDD:293791 18/33 (55%)
WD40 repeat 298..327 CDD:293791 20/28 (71%)
WD40 repeat 341..376 CDD:293791 11/34 (32%)
WD40 repeat 389..433 CDD:293791 12/43 (28%)
WD40 repeat 441..483 CDD:293791 14/44 (32%)

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